BO30960.complete Sequence
403 bp assembled on 2012-03-19
GenBank Submission: KX794683
> BO30960.complete
GAAGTTATCAGTCGACATGCAAAAAGTGCTGGGACGCATCCAGGCGCAGG
TCCTCCGCTCCCGGGCGACGAATGCATTAGCCAATGTGGTTAGACACGAG
GCCACCTCCTCCAGGACAGCGGCTAAACCAGCCGCCACATCCAAAGAATT
CCGGGAGAGACAGGTGCGATTCAACATAAAGAACGAACAGACCGAGGGTA
GACCACTTTACCTGGATGCCCAGGCCACCACTCCAATGGACCCACGTGTA
TTGGACGCTATGCTCCCCTATCTGACCAATTTCTACGGAAATCTGGTTCG
TACGCTTCGCCTTCAACGCCTGGCAAAAGATTCTGGCCTTGGGCAATCAA
CTGGGCACAACATTTGTCTGGGAATTGGACTGCAAGCAAGCTTTCTAGAC
CAT
BO30960.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:05:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Qtzl-RC | 372 | CG31864-PC | 1..369 | 17..385 | 1845 | 100 | Plus |
Qtzl-RA | 372 | CG31864-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
CG12264-RA | 1389 | CG12264-PA | 1..277 | 17..293 | 1385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:05:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Qtzl-RC | 926 | CG31864-RC | 75..443 | 17..385 | 1845 | 100 | Plus |
Qtzl-RA | 672 | CG31864-RA | 75..443 | 17..385 | 1845 | 100 | Plus |
CG12264-RA | 1533 | CG12264-RA | 72..348 | 17..293 | 1385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:05:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11996000..11996240 | 145..385 | 1205 | 100 | Plus |
2L | 23513712 | 2L | 11999911..12000059 | 145..293 | 745 | 100 | Plus |
2L | 23513712 | 2L | 11999725..11999854 | 17..146 | 650 | 100 | Plus |
2L | 23513712 | 2L | 11995814..11995943 | 17..146 | 650 | 100 | Plus |
2L | 23513712 | 2L | 11992235..11992329 | 291..385 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:05:27 has no hits.
BO30960.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:18 Download gff for
BO30960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31864-RA | 23..391 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:25 Download gff for
BO30960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Qtzl-RA | 75..443 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:18 Download gff for
BO30960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Qtzl-RA | 75..443 | 17..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:18 Download gff for
BO30960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11995814..11995943 | 17..146 | 100 | -> | Plus |
2L | 11996002..11996240 | 147..387 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:25 Download gff for
BO30960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11995814..11995943 | 17..146 | 100 | -> | Plus |
arm_2L | 11996002..11996240 | 147..387 | 99 | | Plus |
BO30960.pep Sequence
Translation from 16 to 403
> BO30960.pep
MQKVLGRIQAQVLRSRATNALANVVRHEATSSRTAAKPAATSKEFRERQV
RFNIKNEQTEGRPLYLDAQATTPMDPRVLDAMLPYLTNFYGNLVRTLRLQ
RLAKDSGLGQSTGHNICLGIGLQASFLDH
BO30960.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Qtzl-PC | 123 | CG31864-PC | 1..123 | 1..123 | 618 | 100 | Plus |
Qtzl-PA | 123 | CG31864-PA | 1..123 | 1..123 | 618 | 100 | Plus |
CG12264-PA | 462 | CG12264-PA | 1..92 | 1..92 | 462 | 100 | Plus |