Clone BO30963 Report

Search the DGRC for BO30963

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:309
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG12507-RB
Protein status:BO30963.pep: Imported from assembly
Sequenced Size:946

Clone Sequence Records

BO30963.complete Sequence

946 bp assembled on 2012-03-19

GenBank Submission: KX800115

> BO30963.complete
GAAGTTATCAGTCGACATGTCCGAGAATAGAGTAATCCATATGTGGATGC
GATGTCTGATGCCACTGCTGCTGGCCAACTGCATTGCGGCGAATCCCAGT
TTCGAGGATCCTGACCGTAGTTTGGATATGGAGGCGAAGGACAGCAGCGT
GGTGGATACTATGGGCATGGGCATGGGCGTCCTGGATCCTACGCAGCCAA
AGCAGATGAATTACCAGAAGCCGCCATTGGGTTACAAGGACTACGATTAC
TATCTGGGATCTCGACGAATGGCAGATCCCTATGGGGCCGATAATGATCT
GAGTGCCTCGTCCGCCATTAAGATTCATGGCGAAGGCAATTTGGCTTCGC
TAAACAGGCCAGTCAGTGGTGTCGCCCACAAACCACTGCCCTGGTATGGC
GATTATTCCGGCAAACTGCTGGCCAGTGCTCCCCCGATGTACCCGTCCAG
GTCCTACGATCCCTATATTCGCCGCTACGACAGATATGATGAGCAGTACC
ATAGGAACTATCCACAGTACTTTGAGGACATGTACATGCACCGGCAACGT
TTCGATCCGTATGATAGCTATAGTCCCCGGATACCGCAGTATCCGGAACC
CTACGTTATGTATCCCGACCGCTACCCGGATGCCCCGCCTTTGAGGGATT
ATCCGAAATTGCGGCGCGGATACATCGGTGAACCCATGGCGCCCATCGAT
TCCTACAGCAGCAGCAAGTACGTCTCTTCGAAGCAGTCCGACCTGAGTTT
TCCGGTTCGTAACGAACGCATCGTATACTACGCCCACCTGCCGGAAATCG
TACGGACACCATATGATAGTGGATCACCGGAGGATCGAAACTCGGCGCCT
TACAAGCTGAACAAGAAGAAAATCAAAAATATTCAGCGGCCTTTAGCGAA
TAATTCTACCACGTATAAAATGACATTGGCAAGCTTTCTAGACCAT

BO30963.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:05:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG12507-RB 915 CG12507-PB 1..912 17..928 4560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:05:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG12507-RB 1096 CG12507-RB 44..955 17..928 4560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16266028..16266494 483..17 2335 100 Minus
X 23542271 X 16265383..16265830 928..481 2240 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:05:57 has no hits.

BO30963.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:23 Download gff for BO30963.complete
Subject Subject Range Query Range Percent Splice Strand
CG12507-RB 1..912 17..930 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:39 Download gff for BO30963.complete
Subject Subject Range Query Range Percent Splice Strand
CG12507-RB 44..955 17..930 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:30 Download gff for BO30963.complete
Subject Subject Range Query Range Percent Splice Strand
CG12507-RB 44..955 17..930 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:30 Download gff for BO30963.complete
Subject Subject Range Query Range Percent Splice Strand
X 16265381..16265827 484..930 99 <- Minus
X 16266028..16266494 17..483 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:39 Download gff for BO30963.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16159414..16159860 484..930 99 <- Minus
arm_X 16160061..16160527 17..483 100   Minus

BO30963.pep Sequence

Translation from 16 to 946

> BO30963.pep
MSENRVIHMWMRCLMPLLLANCIAANPSFEDPDRSLDMEAKDSSVVDTMG
MGMGVLDPTQPKQMNYQKPPLGYKDYDYYLGSRRMADPYGADNDLSASSA
IKIHGEGNLASLNRPVSGVAHKPLPWYGDYSGKLLASAPPMYPSRSYDPY
IRRYDRYDEQYHRNYPQYFEDMYMHRQRFDPYDSYSPRIPQYPEPYVMYP
DRYPDAPPLRDYPKLRRGYIGEPMAPIDSYSSSKYVSSKQSDLSFPVRNE
RIVYYAHLPEIVRTPYDSGSPEDRNSAPYKLNKKKIKNIQRPLANNSTTY
KMTLASFLDH

BO30963.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG12507-PB 304 CG12507-PB 1..304 1..304 1657 100 Plus