BO30967.complete Sequence
637 bp assembled on 2012-03-19
GenBank Submission: KX796479
> BO30967.complete
GAAGTTATCAGTCGACATGCTAAAAATTAACGAAGCAATGCCTGAAATCA
AGAGACTTTGCCTCGCCACCGAGAATAGTCATATCGCAGCCAATGCCATG
CTGCTAACAAAGATAGATGAACTCAATTCCCAAGTCCTGTCGCAGCGCGC
AGAAATCGAAAACTTGACGAGGGCGGTTAAGACACTTACGGAATTCGTTA
AGCAGTCGATGAAAACGACCAAGCCGAAGGCGAAGGGAAATCCGGACGAT
GATTTTCCAATTATGTATGAGGAGGATCTGGTCGAAGTGAATCACAAGAT
AAGCCAGGACTCCAGGGGGATCTATACGAATTCCATGCGGAAATTCCTGC
GCCAGGGAAGATTAAGCCGCACCATAAGACTCATTTTCTCCGAGGACATC
CTTCTGAACTACAATATTGATGGGAATCAGAAAAAGAAAAGACTAAAAGA
TCACGAACATCTGTTTCGTTCGCTTATGAACGCCATCGGTCAGGTGGAAC
CGACGCTACCCTCGGAAAAAGTCTTATTCAAAGCCATGAGATGCGTTAAG
AATTGCGCAGCCAAAAAGAAGGGCAAGGTAGATGATGACCCCTTGTCCGT
TTTGAGCGTGGAGAAATCAGCAAGCTTTCTAGACCAT
BO30967.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:06:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12112-RA | 606 | CG12112-PA | 1..603 | 17..619 | 3015 | 100 | Plus |
| CG12112-RB | 591 | CG12112-PB | 1..588 | 17..619 | 2755 | 97.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12112-RA | 1117 | CG12112-RA | 170..772 | 17..619 | 3015 | 100 | Plus |
| CG12112-RB | 1096 | CG12112-RB | 164..751 | 17..619 | 2755 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8559653..8559859 | 325..119 | 1035 | 100 | Minus |
| X | 23542271 | X | 8559426..8559579 | 479..326 | 770 | 100 | Minus |
| X | 23542271 | X | 8559224..8559363 | 619..480 | 700 | 100 | Minus |
| X | 23542271 | X | 8559921..8560023 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:06:04 has no hits.
BO30967.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:24 Download gff for
BO30967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12112-RA | 170..772 | 17..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:44 Download gff for
BO30967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12112-RA | 170..772 | 17..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:34 Download gff for
BO30967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12112-RA | 170..772 | 17..621 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:34 Download gff for
BO30967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8559222..8559363 | 480..621 | 98 | <- | Minus |
| X | 8559426..8559579 | 326..479 | 100 | <- | Minus |
| X | 8559653..8559858 | 120..325 | 100 | <- | Minus |
| X | 8559921..8560023 | 17..119 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:44 Download gff for
BO30967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8453255..8453396 | 480..621 | 98 | <- | Minus |
| arm_X | 8453459..8453612 | 326..479 | 100 | <- | Minus |
| arm_X | 8453686..8453891 | 120..325 | 100 | <- | Minus |
| arm_X | 8453954..8454056 | 17..119 | 100 | | Minus |
BO30967.pep Sequence
Translation from 16 to 637
> BO30967.pep
MLKINEAMPEIKRLCLATENSHIAANAMLLTKIDELNSQVLSQRAEIENL
TRAVKTLTEFVKQSMKTTKPKAKGNPDDDFPIMYEEDLVEVNHKISQDSR
GIYTNSMRKFLRQGRLSRTIRLIFSEDILLNYNIDGNQKKKRLKDHEHLF
RSLMNAIGQVEPTLPSEKVLFKAMRCVKNCAAKKKGKVDDDPLSVLSVEK
SASFLDH
BO30967.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12112-PA | 201 | CG12112-PA | 1..201 | 1..201 | 1014 | 100 | Plus |
| CG12112-PB | 196 | CG12112-PB | 1..196 | 1..201 | 974 | 97.5 | Plus |
| CG42854-PA | 160 | CG42854-PA | 2..158 | 35..187 | 199 | 34 | Plus |
