Clone BO30968 Report

Search the DGRC for BO30968

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:309
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG32364-RA
Protein status:BO30968.pep: Imported from assembly
Sequenced Size:724

Clone Sequence Records

BO30968.complete Sequence

724 bp assembled on 2012-03-19

GenBank Submission: KX794686

> BO30968.complete
GAAGTTATCAGTCGACATGGATTTCGAGAGCAAATACTGCACCAGTCAAG
TAAATGGCACTATTACCATAACTACGCGCAAAGTCCTTGATGAAAATCTA
AAATCCTTACTGGATGAGGGAAAGGGCGAGCTGTTTCTCTCGTGTATACC
GAGGAATCACAGTTGTTCTCCGCGGTGGATTGTGGAAGTGGCCAGCGAAC
TGGGTGAAGTTTACATTATGCGCTATAAGATTGATTTTTCGGGAAATTCT
CGCGGCTACGCCTACTTGCAATATATCAATGTGGACCTCAAGGAATCGGC
AATGCAATATCTGCCAATGCGATTCCGACAGCTTTGCATGTGCTTAAGGG
TGGAGCCATCGACCAACAATCGCGAGCTGGTGCTCAAAAACGTAGAATCG
TCGCTTAGACCATGGCAAGTGTACCAGGAGATGTTGAAGATACATCCCTT
TACCATCGTTCGAGTCTACGAGTATCAATTAGACCAGTTCTTCTATATAT
TTGAGTACCGCAACAACGACTCGGCCGCAAGTGCCCATCAGAGAGTAAGG
AATTCGATCAGAAAATTCGGTGAGCATGCGCACATCTCCTGGTTGACTGC
GGAGAACATCTTGAGCAGAGCCAGCGGTAGCTTCTGTTTTCAACGGGAAG
TAAGCCAAAATCGTACTCGACGCGTTCCTCCCAGACAAAAGGGCTGTTTC
AAGTTTGCAAGCTTTCTAGACCAT

BO30968.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG32364-RA 693 CG32364-PA 1..690 17..706 3450 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG32364-RA 1046 CG32364-RA 73..762 17..706 3450 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8209861..8210257 706..310 1985 100 Minus
3L 28110227 3L 8210313..8210493 309..129 905 100 Minus
3L 28110227 3L 8210558..8210671 130..17 570 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:06:07 has no hits.

BO30968.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:25 Download gff for BO30968.complete
Subject Subject Range Query Range Percent Splice Strand
CG32364-RA 1..690 17..708 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:46 Download gff for BO30968.complete
Subject Subject Range Query Range Percent Splice Strand
CG32364-RA 73..762 17..708 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:37 Download gff for BO30968.complete
Subject Subject Range Query Range Percent Splice Strand
CG32364-RA 73..762 17..708 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:37 Download gff for BO30968.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8209859..8210257 310..708 99 <- Minus
3L 8210313..8210491 131..309 100 <- Minus
3L 8210558..8210671 17..130 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:46 Download gff for BO30968.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8202959..8203357 310..708 99 <- Minus
arm_3L 8203413..8203591 131..309 100 <- Minus
arm_3L 8203658..8203771 17..130 100   Minus

BO30968.pep Sequence

Translation from 16 to 724

> BO30968.pep
MDFESKYCTSQVNGTITITTRKVLDENLKSLLDEGKGELFLSCIPRNHSC
SPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYLP
MRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPFTIVRV
YEYQLDQFFYIFEYRNNDSAASAHQRVRNSIRKFGEHAHISWLTAENILS
RASGSFCFQREVSQNRTRRVPPRQKGCFKFASFLDH

BO30968.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG32364-PA 230 CG32364-PA 1..230 1..230 1216 100 Plus