BO30968.complete Sequence
724 bp assembled on 2012-03-19
GenBank Submission: KX794686
> BO30968.complete
GAAGTTATCAGTCGACATGGATTTCGAGAGCAAATACTGCACCAGTCAAG
TAAATGGCACTATTACCATAACTACGCGCAAAGTCCTTGATGAAAATCTA
AAATCCTTACTGGATGAGGGAAAGGGCGAGCTGTTTCTCTCGTGTATACC
GAGGAATCACAGTTGTTCTCCGCGGTGGATTGTGGAAGTGGCCAGCGAAC
TGGGTGAAGTTTACATTATGCGCTATAAGATTGATTTTTCGGGAAATTCT
CGCGGCTACGCCTACTTGCAATATATCAATGTGGACCTCAAGGAATCGGC
AATGCAATATCTGCCAATGCGATTCCGACAGCTTTGCATGTGCTTAAGGG
TGGAGCCATCGACCAACAATCGCGAGCTGGTGCTCAAAAACGTAGAATCG
TCGCTTAGACCATGGCAAGTGTACCAGGAGATGTTGAAGATACATCCCTT
TACCATCGTTCGAGTCTACGAGTATCAATTAGACCAGTTCTTCTATATAT
TTGAGTACCGCAACAACGACTCGGCCGCAAGTGCCCATCAGAGAGTAAGG
AATTCGATCAGAAAATTCGGTGAGCATGCGCACATCTCCTGGTTGACTGC
GGAGAACATCTTGAGCAGAGCCAGCGGTAGCTTCTGTTTTCAACGGGAAG
TAAGCCAAAATCGTACTCGACGCGTTCCTCCCAGACAAAAGGGCTGTTTC
AAGTTTGCAAGCTTTCTAGACCAT
BO30968.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32364-RA | 693 | CG32364-PA | 1..690 | 17..706 | 3450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:06:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32364-RA | 1046 | CG32364-RA | 73..762 | 17..706 | 3450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8209861..8210257 | 706..310 | 1985 | 100 | Minus |
3L | 28110227 | 3L | 8210313..8210493 | 309..129 | 905 | 100 | Minus |
3L | 28110227 | 3L | 8210558..8210671 | 130..17 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:06:07 has no hits.
BO30968.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:25 Download gff for
BO30968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32364-RA | 1..690 | 17..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:46 Download gff for
BO30968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32364-RA | 73..762 | 17..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:37 Download gff for
BO30968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32364-RA | 73..762 | 17..708 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:37 Download gff for
BO30968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8209859..8210257 | 310..708 | 99 | <- | Minus |
3L | 8210313..8210491 | 131..309 | 100 | <- | Minus |
3L | 8210558..8210671 | 17..130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:46 Download gff for
BO30968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8202959..8203357 | 310..708 | 99 | <- | Minus |
arm_3L | 8203413..8203591 | 131..309 | 100 | <- | Minus |
arm_3L | 8203658..8203771 | 17..130 | 100 | | Minus |
BO30968.pep Sequence
Translation from 16 to 724
> BO30968.pep
MDFESKYCTSQVNGTITITTRKVLDENLKSLLDEGKGELFLSCIPRNHSC
SPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYLP
MRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPFTIVRV
YEYQLDQFFYIFEYRNNDSAASAHQRVRNSIRKFGEHAHISWLTAENILS
RASGSFCFQREVSQNRTRRVPPRQKGCFKFASFLDH
BO30968.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32364-PA | 230 | CG32364-PA | 1..230 | 1..230 | 1216 | 100 | Plus |