BO30970.complete Sequence
457 bp assembled on 2012-03-19
> BO30970.complete
GAAGTTATCAGTCGACATGAAATTCGCCGTCGCCGTTATCTTCACCTTGG
CCCTCGCCATGGGCGTGCAGTCGTCTGTGATCCCCCTGCTGTCCCAGGTG
GCTGGACATGGACTGTCCTACACCGCCGTTTCCGGACCCGCTGTGGTGGC
CTCTCCCTGGGCCGTTCCCGCCGCCCACTGGCCTGCTGCCGTGAACGTGG
CTTCGTGGCCTCCGGCAGCGATCCACGCCGCCGCTCCTGCCGTGCTTGCT
GCCCCTGCTCCCGCTGTGGTTGCTGCTCATGCTCCCTCAGTCGTCGTGGC
CCCAGTGGCTCACAGTGGCGTCTACACTGCCCAGACCCGTGGTGCCATTC
ACACCGCTCCTCTGGCCGGACACATCCAGTCGGTGGCCTCCATCAATGCC
GCTCCCGCACCCGGAACCTTGGCAAGCTTTCTAGACCATTCGTTGGGCGC
GAAAGGG
BO30970.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp1-RA | 408 | CG7216-PA | 1..405 | 17..421 | 2025 | 100 | Plus |
| CG31904-RB | 1212 | CG31904-PB | 670..1057 | 23..421 | 1795 | 97.2 | Plus |
| CG31904-RD | 1212 | CG31904-PD | 670..1057 | 23..421 | 1795 | 97.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp1-RA | 858 | CG7216-RA | 56..461 | 16..421 | 2030 | 100 | Plus |
| CG31904-RB | 3572 | CG31904-RB | 2781..3168 | 23..421 | 1795 | 97.2 | Plus |
| CG31904-RD | 1943 | CG31904-RD | 1152..1539 | 23..421 | 1795 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7740959..7741357 | 421..23 | 1995 | 100 | Minus |
| 2L | 23513712 | 2L | 7734819..7735206 | 421..23 | 1795 | 97.2 | Minus |
| 2L | 23513712 | 2L | 7744256..7744303 | 376..329 | 180 | 91.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:05:42 has no hits.
BO30970.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:21 Download gff for
BO30970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp1-RA | 62..470 | 17..426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:33 Download gff for
BO30970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp1-RA | 57..465 | 17..426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:25 Download gff for
BO30970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp1-RA | 57..465 | 17..426 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:25 Download gff for
BO30970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7740955..7741363 | 17..426 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:33 Download gff for
BO30970.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7740955..7741363 | 17..426 | 98 | | Minus |
BO30970.pep Sequence
Translation from 16 to 457
> BO30970.pep
MKFAVAVIFTLALAMGVQSSVIPLLSQVAGHGLSYTAVSGPAVVASPWAV
PAAHWPAAVNVASWPPAAIHAAAPAVLAAPAPAVVAAHAPSVVVAPVAHS
GVYTAQTRGAIHTAPLAGHIQSVASINAAPAPGTLASFLDHSLGAKG
BO30970.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp1-PA | 135 | CG7216-PA | 1..135 | 1..135 | 678 | 100 | Plus |
| CG31904-PB | 403 | CG31904-PB | 224..341 | 3..120 | 596 | 100 | Plus |
| CG31904-PD | 403 | CG31904-PD | 224..341 | 3..120 | 596 | 100 | Plus |
| CG7203-PC | 129 | CG7203-PC | 1..128 | 1..134 | 276 | 52.9 | Plus |
| CG7203-PB | 129 | CG7203-PB | 1..128 | 1..134 | 276 | 52.9 | Plus |
