BO30979.complete Sequence
628 bp assembled on 2012-03-19
GenBank Submission: KX795974
> BO30979.complete
GAAGTTATCAGTCGACATGCAGACGCAGTGTATCCTCCTTCTCTTGGCCG
CCAGTCTGGCCATATGTGTGGCGCGTCCGGAACCACCTAGATCGCGTTAC
GGACCGCCGCCACCGCCGGCTCCCCAAAAGGAATACGGTCCTCCGGCCCC
GGCAGCACAGCCTCTACCCGTTTACGGACCACCAGCCGCCTTCTACGGAC
CACCAGCCGCCTCGGAGGCGCTCGTGACCAAGAACGTGTACGTGCATGTG
CCGCCAGAGGAGCCAGAGTTCTATCCGGCCTCGTCGCCCATCCAGACGGC
CGTTCCCAAGAAGCACTACAAGATCATCTTCATCAAGGCGCCCAACCCTC
CGACCCCTGTGCGCCAGGTGCTCCCTCCTCCGGTCCAGGATGAGCACAAG
ACCCTTGTGTATGTTCTGGTCAAGAAGCCCGAGGAGCAGCAGCCCGTCAT
CCTGCCCGCTCCAGAGCCCACAGAGCCCAGCAAGCCAGAGGTCTACTTCA
TCAAGTATAAGCAGCAGCAGGCCAAGCCGGCCACCCAGTACGGCCCACCA
CCGTCCGCCCCATCCGAGGAGTACGGAGCACCACCTGCCCCCCGCACCGT
CGAGCAGTTCGCAAGCTTTCTAGACCAT
BO30979.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:06:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlBeta-RA | 597 | CG8986-PA | 1..594 | 17..610 | 2970 | 100 | Plus |
| TwdlE-RA | 594 | CG14534-PA | 355..459 | 398..502 | 180 | 78.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:06:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlBeta-RA | 716 | CG8986-RA | 37..631 | 16..610 | 2975 | 100 | Plus |
| lectin-28C-RC | 3044 | CG7106-RC | 1629..1733 | 502..398 | 180 | 78.1 | Minus |
| TwdlE-RA | 1346 | CG14534-RA | 494..598 | 398..502 | 180 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11862622..11863216 | 610..16 | 2975 | 100 | Minus |
| 2L | 23513712 | 2L | 7858705..7858809 | 502..398 | 180 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:06:21 has no hits.
BO30979.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:28 Download gff for
BO30979.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlBeta-RA | 34..627 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:54 Download gff for
BO30979.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlBeta-RA | 38..631 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:43 Download gff for
BO30979.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlBeta-RA | 38..631 | 17..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:43 Download gff for
BO30979.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11862620..11863215 | 17..612 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:54 Download gff for
BO30979.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7750125..7750720 | 17..612 | 99 | | Minus |
BO30979.pep Sequence
Translation from 16 to 628
> BO30979.pep
MQTQCILLLLAASLAICVARPEPPRSRYGPPPPPAPQKEYGPPAPAAQPL
PVYGPPAAFYGPPAASEALVTKNVYVHVPPEEPEFYPASSPIQTAVPKKH
YKIIFIKAPNPPTPVRQVLPPPVQDEHKTLVYVLVKKPEEQQPVILPAPE
PTEPSKPEVYFIKYKQQQAKPATQYGPPPSAPSEEYGAPPAPRTVEQFAS
FLDH
BO30979.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlBeta-PA | 198 | CG8986-PA | 1..198 | 1..198 | 1072 | 100 | Plus |
| TwdlE-PA | 197 | CG14534-PA | 1..195 | 1..189 | 501 | 50.5 | Plus |
| TwdlC-PA | 360 | CG14254-PA | 68..252 | 23..199 | 340 | 43.1 | Plus |
| TwdlT-PA | 286 | CG5812-PA | 122..229 | 61..168 | 311 | 55.6 | Plus |
| TwdlG-PC | 278 | CG14643-PC | 92..213 | 53..168 | 223 | 41.8 | Plus |
