Clone BO30987 Report

Search the DGRC for BO30987

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:309
Well:87
Vector:pDNR-Dual
Associated Gene/TranscriptCG6216-RB
Protein status:BO30987.pep: Imported from assembly
Sequenced Size:739

Clone Sequence Records

BO30987.complete Sequence

739 bp assembled on 2012-03-19

GenBank Submission: KX797395

> BO30987.complete
GAAGTTATCAGTCGACATGAGCAAACTAGACGATCTGCTGTCCAAAAAGA
AGACGGTGGTGCCCGTCTTGGATCTCAGCCGCAGCAATATTCAGACCGTC
GAGGAGTTCAAACGGCTGCTGGAGAAGGTGCCCGACTACAAGATGCGACC
GGTGAAGGTGCGCGCCGAGGAGATAAAGATCCGGGAGAAGGACTACGCCT
TCAAGATGCCCAAAAAGGAGATGCGAAAGCTGCTGCGAGCCAACGGGGAA
CGAGAGGCGATGTACACCTATGCGGATCCGGTGCCCGGTGAAATGAAGGA
TGTGGTGCTGATGGAACTGTGTGCGGTGCCCATCGATTGGAAGATGCTGA
CCACGCTGAGGCCCAAGAACAAACAGGAGGAGGAATACTTCAGCCGCATG
GTTGAGATGGGAAAGTTGGAGCTTAAAACCGAGGCTCGCGATCGCCGAGA
GTTTGCCCTAAACAATTGTGTCAAGAAAATCAAGAATAAATCGGGAATTG
TGGAAACTCGACTGATGACCTGTGAGTCCTGCGGCGAGGAAATGTGTTGT
GGCAAGACTTGCGGCGACTTCAATTACGATCTGTACATTCGGGTTGAGGC
CAGGGTGATTAAGCCGAAACCGGCACCTTTGTCCTCCAACAAGGCCAAAT
TAAATGGACGCAAAAAGTCATCGGTGGGCGGAACCAAGATCAAGGTCAAA
AAGGCATCAAGCAAAGCCAGCGCAAGCTTTCTAGACCAT

BO30987.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG6216-RB 708 CG6216-PB 1..705 17..721 3525 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG6216-RB 1073 CG6216-RB 37..741 17..721 3525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11150135..11150670 552..17 2680 100 Minus
3L 28110227 3L 11149910..11150080 721..551 855 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:06:28 has no hits.

BO30987.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:29 Download gff for BO30987.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 37..741 17..723 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:09:57 Download gff for BO30987.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 37..741 17..723 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:47 Download gff for BO30987.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 37..741 17..723 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:47 Download gff for BO30987.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11149908..11150079 552..723 98 <- Minus
3L 11150136..11150670 17..551 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:09:57 Download gff for BO30987.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11143008..11143179 552..723 98 <- Minus
arm_3L 11143236..11143770 17..551 100   Minus

BO30987.pep Sequence

Translation from 16 to 739

> BO30987.pep
MSKLDDLLSKKKTVVPVLDLSRSNIQTVEEFKRLLEKVPDYKMRPVKVRA
EEIKIREKDYAFKMPKKEMRKLLRANGEREAMYTYADPVPGEMKDVVLME
LCAVPIDWKMLTTLRPKNKQEEEYFSRMVEMGKLELKTEARDRREFALNN
CVKKIKNKSGIVETRLMTCESCGEEMCCGKTCGDFNYDLYIRVEARVIKP
KPAPLSSNKAKLNGRKKSSVGGTKIKVKKASSKASASFLDH

BO30987.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG6216-PB 235 CG6216-PB 1..235 1..235 1206 100 Plus