Clone BO30991 Report

Search the DGRC for BO30991

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:309
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG5172-RC
Protein status:BO30991.pep: Imported from assembly
Sequenced Size:352

Clone Sequence Records

BO30991.complete Sequence

352 bp assembled on 2012-03-19

GenBank Submission: KX800022

> BO30991.complete
GAAGTTATCAGTCGACATGCGTCACGCTGTGATCCTTGTTTTCGTGTGTT
GCCTGCTGATCGCCTTAACCTCAGCCGGTTTGCTGGGCGGTGGAGGCGGT
GGTGGTGGCTACGGCGGTGGTGGTGGTGGTGGCTACGGCGGTGGTGGTGG
TGGTCAGAGCGGCTACGGCGGCGGTGGCCAAAAGAACGGAGGAGGCGGCC
ATGGAGGTGGCGGCCAGGGAAGCTACGGAGGCGGTAGCCAAGGTGGACAT
GGAGGCGGTGGCCAAGGAGGTTGGCAGAAGAACGGAGGAGGTGCAGCTAA
TCCACCGTCTGATGCTGACTTGTGTTCCATGGCAGCAAGCTTTCTAGACC
AT

BO30991.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:06:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG5172-RC 321 CG5172-PC 1..318 17..334 1590 100 Plus
CG5172-RD 519 CG5172-PD 1..277 17..293 1385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:06:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG5172-RC 531 CG5172-RC 106..423 17..334 1590 100 Plus
CG5172-RD 788 CG5172-RD 106..382 17..293 1385 100 Plus
CG5172-RD 788 CG5172-RD 635..680 289..334 215 97.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17221547..17221773 17..243 1135 100 Plus
X 23542271 X 17222124..17222176 241..293 265 100 Plus
X 23542271 X 17222498..17222543 289..334 215 97.8 Plus
Blast to na_te.dros performed on 2014-11-28 04:06:35 has no hits.

BO30991.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:31 Download gff for BO30991.complete
Subject Subject Range Query Range Percent Splice Strand
CG5172-RC 106..423 17..336 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:02 Download gff for BO30991.complete
Subject Subject Range Query Range Percent Splice Strand
CG5172-RC 106..423 17..336 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:50 Download gff for BO30991.complete
Subject Subject Range Query Range Percent Splice Strand
CG5172-RC 106..423 17..336 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:50 Download gff for BO30991.complete
Subject Subject Range Query Range Percent Splice Strand
X 17221547..17221772 17..242 100 -> Plus
X 17222126..17222176 243..293 100 -> Plus
X 17222503..17222543 294..336 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:02 Download gff for BO30991.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17115580..17115805 17..242 100 -> Plus
arm_X 17116159..17116209 243..293 100 -> Plus
arm_X 17116536..17116576 294..336 95   Plus

BO30991.pep Sequence

Translation from 16 to 352

> BO30991.pep
MRHAVILVFVCCLLIALTSAGLLGGGGGGGGYGGGGGGGYGGGGGGQSGY
GGGGQKNGGGGHGGGGQGSYGGGSQGGHGGGGQGGWQKNGGGAANPPSDA
DLCSMAASFLDH

BO30991.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG5172-PC 106 CG5172-PC 1..106 1..106 600 100 Plus
CG5172-PD 172 CG5172-PD 1..92 1..92 526 100 Plus
CG14191-PA 193 CG14191-PA 3..130 8..91 251 45.3 Plus
CG11458-PA 98 CG11458-PA 1..96 1..92 240 54.1 Plus
Fib-PA 344 CG9888-PA 28..97 24..92 235 61.4 Plus
CG14191-PA 193 CG14191-PA 79..176 13..94 213 49.5 Plus
CG14191-PA 193 CG14191-PA 87..189 26..93 196 45.6 Plus
CG5172-PD 172 CG5172-PD 101..171 21..92 166 48.6 Plus
CG14191-PA 193 CG14191-PA 113..193 18..86 151 45.1 Plus
CG11458-PA 98 CG11458-PA 55..97 24..66 139 66.7 Plus
CG11458-PA 98 CG11458-PA 58..97 21..61 137 68.2 Plus