Clone BO30992 Report

Search the DGRC for BO30992

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:309
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptObp18a-RA
Protein status:BO30992.pep: Imported from assembly
Sequenced Size:418

Clone Sequence Records

BO30992.complete Sequence

418 bp assembled on 2012-03-19

GenBank Submission: KX798244

> BO30992.complete
GAAGTTATCAGTCGACATGAAGGTTGTGTGCAGCATAGCTGTACTATGGA
TTTGCTTGATAACTATGTGGCAATCAGCTGGCCGCGTTAACGCAGAGGGT
TGCCTAAAGCACCACAATCTGACCAGTGCCCAAGTGCAGGCAGTGGCTCC
ATCCACTCCCGTTGCGGATGTTCCAGTGGCCGTTAAGTGCTATAGCCGGT
GTCTGATCCAGGATTATTTCGGTGATGATGGGAAAATCGATCTGCAGAAG
GTGGGAAAGCGAGGATCTCAAGAGGACCACGTGATTTTGTCCCAGTGTAA
GCAGCAGTTCGATGGCGTCACCAATCTGGACACGTGCGACTATCCATACC
TGATTCTCCAGTGTTATTTTAAGGGCAAGCAGAGTGGAACTATCGCCTCG
GCAAGCTTTCTAGACCAT

BO30992.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
Obp18a-RA 387 CG15883-PA 1..384 17..400 1920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
Obp18a-RA 734 CG15883-RA 21..409 12..400 1930 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19135406..19135739 400..67 1670 100 Minus
X 23542271 X 19135793..19135848 67..12 265 98.2 Minus
Blast to na_te.dros performed on 2014-11-28 04:06:39 has no hits.

BO30992.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 11:49:32 Download gff for BO30992.complete
Subject Subject Range Query Range Percent Splice Strand
Obp18a-RA 26..409 17..402 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:04 Download gff for BO30992.complete
Subject Subject Range Query Range Percent Splice Strand
Obp18a-RA 26..409 17..402 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:53 Download gff for BO30992.complete
Subject Subject Range Query Range Percent Splice Strand
Obp18a-RA 26..409 17..402 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:53 Download gff for BO30992.complete
Subject Subject Range Query Range Percent Splice Strand
X 19135404..19135738 68..402 99 <- Minus
X 19135793..19135843 17..67 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:04 Download gff for BO30992.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19029437..19029771 68..402 99 <- Minus
arm_X 19029826..19029876 17..67 100   Minus

BO30992.pep Sequence

Translation from 16 to 418

> BO30992.pep
MKVVCSIAVLWICLITMWQSAGRVNAEGCLKHHNLTSAQVQAVAPSTPVA
DVPVAVKCYSRCLIQDYFGDDGKIDLQKVGKRGSQEDHVILSQCKQQFDG
VTNLDTCDYPYLILQCYFKGKQSGTIASASFLDH

BO30992.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
Obp18a-PA 128 CG15883-PA 1..128 1..128 686 100 Plus