BO30994.complete Sequence
487 bp assembled on 2012-05-04
GenBank Submission: KX797606
> BO30994.complete
GAAGTTATCAGTCGACATGTCCAAGCGCAACATAACGTACGTAAAGCCGC
AAGAACCTAGTTTTCTGGCCAAGTTGAAGGCTGAAATTGGCTACAAGGAG
GGACCCACCGTAGAGACCAAGCGTCAGCGATTGGATCCGCAGGACCAGGA
GGACTACGATTCTGAGGAAGATTCACGGGAGGACGAACAGCCGCAGGTGG
TCGTCCTTAGGCCGGGAGATCTATCCGCCGAAGAGGCCAAAACGGAGAAA
CTGTTGGCCTCCAAAGAATTAGCCGAAAAGCGAGCGGATCTGACGCAGCC
AATAGTCTTCAAACACTGTGTCAAGCAGCCCAACATCGAGAAAAAAGAGT
CCCAATCTGAAACCAACAAGAAGTCCGAAAAATCCAGCACATCCAAGAGC
AAGAAGTCCAAGGCCGCCAGTAGTAAGCTGTCCTTCAACGAGGACGAGGA
GGACGAGACTGCCGAGGATGCAAGCTTTCTAGACCAT
BO30994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:55:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42245-RA | 456 | CG42245-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42245-RA | 5111 | CG42245-RA | 98..550 | 17..469 | 2265 | 100 | Plus |
MEP-1-RC | 5111 | CG1244-RC | 98..550 | 17..469 | 2265 | 100 | Plus |
MEP-1-RG | 5171 | CG1244-RG | 261..610 | 120..469 | 1750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:54:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2633536..2633740 | 265..469 | 1025 | 100 | Plus |
3L | 28110227 | 3L | 2631975..2632121 | 120..266 | 735 | 100 | Plus |
3L | 28110227 | 3L | 2631812..2631916 | 17..121 | 525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:54:58 has no hits.
BO30994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-04 14:14:18 Download gff for
BO30994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42245-RA | 93..545 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:05 Download gff for
BO30994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42245-RA | 98..550 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:44 Download gff for
BO30994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MEP-1-RC | 98..550 | 17..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:44 Download gff for
BO30994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2631812..2631916 | 17..121 | 100 | -> | Plus |
3L | 2631977..2632121 | 122..266 | 100 | -> | Plus |
3L | 2633538..2633740 | 267..471 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:05 Download gff for
BO30994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2631977..2632121 | 122..266 | 100 | -> | Plus |
arm_3L | 2633538..2633740 | 267..471 | 99 | | Plus |
arm_3L | 2631812..2631916 | 17..121 | 100 | -> | Plus |
BO30994.pep Sequence
Translation from 16 to 487
> BO30994.pep
MSKRNITYVKPQEPSFLAKLKAEIGYKEGPTVETKRQRLDPQDQEDYDSE
EDSREDEQPQVVVLRPGDLSAEEAKTEKLLASKELAEKRADLTQPIVFKH
CVKQPNIEKKESQSETNKKSEKSSTSKSKKSKAASSKLSFNEDEEDETAE
DASFLDH
BO30994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42245-PA | 151 | CG42245-PA | 1..151 | 1..151 | 757 | 100 | Plus |