Clone BO30994 Report

Search the DGRC for BO30994

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:309
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG42245-RA
Protein status:BO30994.pep: Imported from assembly
Sequenced Size:487

Clone Sequence Records

BO30994.complete Sequence

487 bp assembled on 2012-05-04

GenBank Submission: KX797606

> BO30994.complete
GAAGTTATCAGTCGACATGTCCAAGCGCAACATAACGTACGTAAAGCCGC
AAGAACCTAGTTTTCTGGCCAAGTTGAAGGCTGAAATTGGCTACAAGGAG
GGACCCACCGTAGAGACCAAGCGTCAGCGATTGGATCCGCAGGACCAGGA
GGACTACGATTCTGAGGAAGATTCACGGGAGGACGAACAGCCGCAGGTGG
TCGTCCTTAGGCCGGGAGATCTATCCGCCGAAGAGGCCAAAACGGAGAAA
CTGTTGGCCTCCAAAGAATTAGCCGAAAAGCGAGCGGATCTGACGCAGCC
AATAGTCTTCAAACACTGTGTCAAGCAGCCCAACATCGAGAAAAAAGAGT
CCCAATCTGAAACCAACAAGAAGTCCGAAAAATCCAGCACATCCAAGAGC
AAGAAGTCCAAGGCCGCCAGTAGTAAGCTGTCCTTCAACGAGGACGAGGA
GGACGAGACTGCCGAGGATGCAAGCTTTCTAGACCAT

BO30994.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG42245-RA 456 CG42245-PA 1..453 17..469 2265 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG42245-RA 5111 CG42245-RA 98..550 17..469 2265 100 Plus
MEP-1-RC 5111 CG1244-RC 98..550 17..469 2265 100 Plus
MEP-1-RG 5171 CG1244-RG 261..610 120..469 1750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:54:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2633536..2633740 265..469 1025 100 Plus
3L 28110227 3L 2631975..2632121 120..266 735 100 Plus
3L 28110227 3L 2631812..2631916 17..121 525 100 Plus
Blast to na_te.dros performed on 2014-11-28 12:54:58 has no hits.

BO30994.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-04 14:14:18 Download gff for BO30994.complete
Subject Subject Range Query Range Percent Splice Strand
CG42245-RA 93..545 17..471 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:05 Download gff for BO30994.complete
Subject Subject Range Query Range Percent Splice Strand
CG42245-RA 98..550 17..471 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:44 Download gff for BO30994.complete
Subject Subject Range Query Range Percent Splice Strand
MEP-1-RC 98..550 17..471 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:44 Download gff for BO30994.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2631812..2631916 17..121 100 -> Plus
3L 2631977..2632121 122..266 100 -> Plus
3L 2633538..2633740 267..471 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:05 Download gff for BO30994.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2631977..2632121 122..266 100 -> Plus
arm_3L 2633538..2633740 267..471 99   Plus
arm_3L 2631812..2631916 17..121 100 -> Plus

BO30994.pep Sequence

Translation from 16 to 487

> BO30994.pep
MSKRNITYVKPQEPSFLAKLKAEIGYKEGPTVETKRQRLDPQDQEDYDSE
EDSREDEQPQVVVLRPGDLSAEEAKTEKLLASKELAEKRADLTQPIVFKH
CVKQPNIEKKESQSETNKKSEKSSTSKSKKSKAASSKLSFNEDEEDETAE
DASFLDH

BO30994.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG42245-PA 151 CG42245-PA 1..151 1..151 757 100 Plus