BO31003.complete Sequence
1057 bp assembled on 2012-03-09
GenBank Submission: KX799509
> BO31003.complete
GAAGTTATCAGTCGACATGTTACTTATTAATATTGTAGTGCCAACAGAGC
ATCTCTTTGTCCTCAGTATTCATAAGTGTGACATTCGTCCATTTGTGGTA
GAGGGGAAACAAGTTGGTCTTATTAAGTCAGATGTTTTAAAACATCTCGA
AAAGTATCCTGAAGTATTTTGCATTCGTGCTTGTGAGCAAACTAAACAGG
GTTTGGTAGAGCTAAATCCTGCTTTTCGTGACTATAACGAGCGCACTGAG
CAACTGGAAAAGGTTTTGCGTAACTTGCGCTCCGAGGGACTTTTTCCTGC
ATTACAGGGATGGAGAGATGAGTATTTCGAGGTAAAAGCAGACTGCAGAG
CTCTACTTAAAATGGAACGAGCTGCTACTCCGCTCTTTGGAGTGCGCAAG
TACGGCGTCGATATAAACGGTTACGTAAGACATCCGACGCTTGGACTATG
CATTTGGCTGCAGCAGCGGTCAAACACAAAAGAGACCTGGCCTGGAAAGT
GGGACAATATGGTAGGCGGTGGACTTTCAGTCGGCTTTGGTATTAAGGAA
ACAGCCATTAAGGAGGCTGCAGAGGAGGCATCAATTCCTTCTGACCTAGT
CAAGAATTTGGTGTCCGCAGGATGTGTCTCATTTTACTTTGAAAGCCGAC
AAGGACTTTTTCCCAATACCGAATATGTTTTCGACTTAGAGCTACCACTT
GACTTTGTGCCTCAAAACGCTGACGGGGAGGTCCAGGCCTTTGAGCTGCT
AACAGCCAAGGACTGTGTGGAGCGCGTTTTTACTTCAGATTTCAAGACAA
CTTCAGCGCCTGTGGTGATTGATTTTCTTATCCGACACGGTCACATAACA
GCAGATGATGTTGTCGACTTCACACAAATCGTTGAGCTCTTGCACGTGCC
CTTACAGTCCATATATACGTACAAGACACGCTTTGAGCAATCCATAAAAC
AACCTCAATTCTTGCCAGGTGATTCCAAAAACTGTAACTGTGCAATATTT
CAGAAAATATCAATGGAGAATGGGCACAAGAAGGCGAATGCAAGCTTTCT
AGACCAT
BO31003.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12567-RF | 1026 | CG12567-PF | 1..1023 | 17..1039 | 5115 | 100 | Plus |
| CG12567-RG | 1050 | CG12567-PG | 74..1047 | 66..1039 | 4870 | 100 | Plus |
| CG12567-RD | 1008 | CG12567-PD | 32..1005 | 66..1039 | 4870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12567-RF | 1885 | CG12567-RF | 24..1046 | 17..1039 | 5115 | 100 | Plus |
| CG12567-RG | 1907 | CG12567-RG | 95..1068 | 66..1039 | 4870 | 100 | Plus |
| CG12567-RD | 1875 | CG12567-RD | 63..1036 | 66..1039 | 4870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 23162212..23162876 | 860..196 | 3325 | 100 | Minus |
| 2L | 23513712 | 2L | 23323955..23324192 | 860..623 | 1070 | 96.6 | Minus |
| 2L | 23513712 | 2L | 23415916..23416153 | 623..860 | 1070 | 96.6 | Plus |
| 2L | 23513712 | 2L | 23161961..23162140 | 1039..860 | 900 | 100 | Minus |
| 2L | 23513712 | 2L | 23162924..23163058 | 200..66 | 675 | 100 | Minus |
| 2L | 23513712 | 2L | 23320511..23320637 | 1039..913 | 560 | 96.1 | Minus |
| 2L | 23513712 | 2L | 23174410..23174461 | 68..17 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:04:53 has no hits.
BO31003.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:24 Download gff for
BO31003.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12567-RF | 29..1046 | 22..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:56 Download gff for
BO31003.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12567-RF | 29..1046 | 22..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:03:47 Download gff for
BO31003.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12567-RF | 29..1046 | 22..1041 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:03:47 Download gff for
BO31003.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 23161959..23162139 | 861..1041 | 98 | <- | Minus |
| 2L | 23162212..23162872 | 200..860 | 100 | <- | Minus |
| 2L | 23162925..23163058 | 66..199 | 100 | <- | Minus |
| 2L | 23174413..23174456 | 22..65 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:56 Download gff for
BO31003.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2LHet | 20470..20650 | 861..1041 | 98 | <- | Minus |
| 2LHet | 20723..21383 | 200..860 | 100 | <- | Minus |
| 2LHet | 21436..21569 | 66..199 | 100 | <- | Minus |
| 2LHet | 32924..32967 | 22..65 | 100 | | Minus |
BO31003.pep Sequence
Translation from 16 to 1057
> BO31003.pep
MLLINIVVPTEHLFVLSIHKCDIRPFVVEGKQVGLIKSDVLKHLEKYPEV
FCIRACEQTKQGLVELNPAFRDYNERTEQLEKVLRNLRSEGLFPALQGWR
DEYFEVKADCRALLKMERAATPLFGVRKYGVDINGYVRHPTLGLCIWLQQ
RSNTKETWPGKWDNMVGGGLSVGFGIKETAIKEAAEEASIPSDLVKNLVS
AGCVSFYFESRQGLFPNTEYVFDLELPLDFVPQNADGEVQAFELLTAKDC
VERVFTSDFKTTSAPVVIDFLIRHGHITADDVVDFTQIVELLHVPLQSIY
TYKTRFEQSIKQPQFLPGDSKNCNCAIFQKISMENGHKKANASFLDH
BO31003.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12567-PF | 341 | CG12567-PF | 1..341 | 1..341 | 1795 | 100 | Plus |
| CG12567-PG | 349 | CG12567-PG | 20..349 | 12..341 | 1716 | 98.2 | Plus |
| CG12567-PA | 349 | CG12567-PA | 20..349 | 12..341 | 1716 | 98.2 | Plus |
| CG12567-PD | 335 | CG12567-PD | 10..335 | 16..341 | 1714 | 99.4 | Plus |
| CG12567-PC | 70 | CG12567-PC | 20..69 | 12..61 | 239 | 88 | Plus |
