BO31008.complete Sequence
754 bp assembled on 2012-03-09
GenBank Submission: KX796677
> BO31008.complete
GAAGTTATCAGTCGACATGAACGGACTGCCGCCGAGCAAGCACTACAACC
TGACGCACTACCAGCAGCGCTACAACTGGGACTGCGGTCTGTCCTGCATC
ATTATGATCCTGTCGGCGCAGCAAAGGGAACAGCTTCTTGGGAACTTTGA
TGCCGTGTGCGGCGAGGAGGGATTTGGCTCGAGCACCTGGACCATCGACC
TGTGCTATCTGCTGATGCGCTACCAGGTGCGCCACGAGTACTTCACCCAA
ACGCTCGGGATCGATCCCAACTACGCGCAGCACACGTACTACTCCAAGAT
CATCGACAAGGACGAACGGCGCGTGACGCGCAAGTTCAAGGACGCCCGGG
CCCATGGACTGCGCGTTGAACAGCGCACCGTGGACATGGAGGTCATTCTG
CGGCATTTGGCCCGCCACGGACCCGTCATCCTGCTGACCAACGCCTCGCT
GCTCACGTGCGAGGTGTGCAAGCGCAATGTCCTAGAGAAGTTCGGCTGTT
TTCATATACCCTGCATTGCTCAAAATACACGCCTCCATGGACCCAAAAGG
TATGCCGGACACTATGTGGTGCTCTGCGGATATGACATGGCCGCCCAGAA
GCTCTTCTACCACAATCCCGAGGTCCACGATGGCCACATTTGTCGCTGCC
TCATCGAGTCCATGGACACGGCCCGACGCGCCTACGGCACGGACGAGGAC
ATCATTTTCATATACGAGAAGAAGGAAACTAGGGAGGCAAGCTTTCTAGA
CCAT
BO31008.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:05:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13760-RC | 723 | CG13760-PC | 1..720 | 17..736 | 3600 | 100 | Plus |
CG13760-RD | 669 | CG13760-PD | 1..479 | 17..495 | 2395 | 100 | Plus |
CG13760-RD | 669 | CG13760-PD | 479..666 | 549..736 | 940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:05:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13760-RC | 1524 | CG13760-RC | 255..974 | 17..736 | 3600 | 100 | Plus |
CG13760-RD | 1389 | CG13760-RD | 174..652 | 17..495 | 2395 | 100 | Plus |
CG13760-RD | 1389 | CG13760-RD | 652..839 | 549..736 | 940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:05:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2584667..2584939 | 495..223 | 1365 | 100 | Minus |
X | 23542271 | X | 2584995..2585207 | 229..17 | 1065 | 100 | Minus |
X | 23542271 | X | 2584463..2584603 | 635..495 | 705 | 100 | Minus |
X | 23542271 | X | 2584295..2584395 | 736..636 | 505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:05:29 has no hits.
BO31008.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:26 Download gff for
BO31008.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13760-RC | 255..974 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:05 Download gff for
BO31008.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13760-RC | 255..974 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:03:58 Download gff for
BO31008.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13760-RC | 255..974 | 17..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:03:58 Download gff for
BO31008.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2584293..2584395 | 636..738 | 98 | <- | Minus |
X | 2584463..2584602 | 496..635 | 100 | <- | Minus |
X | 2584667..2584935 | 227..495 | 100 | <- | Minus |
X | 2584998..2585207 | 17..226 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:05 Download gff for
BO31008.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2478326..2478428 | 636..738 | 98 | <- | Minus |
arm_X | 2478496..2478635 | 496..635 | 100 | <- | Minus |
arm_X | 2478700..2478968 | 227..495 | 100 | <- | Minus |
arm_X | 2479031..2479240 | 17..226 | 100 | | Minus |
BO31008.pep Sequence
Translation from 16 to 754
> BO31008.pep
MNGLPPSKHYNLTHYQQRYNWDCGLSCIIMILSAQQREQLLGNFDAVCGE
EGFGSSTWTIDLCYLLMRYQVRHEYFTQTLGIDPNYAQHTYYSKIIDKDE
RRVTRKFKDARAHGLRVEQRTVDMEVILRHLARHGPVILLTNASLLTCEV
CKRNVLEKFGCFHIPCIAQNTRLHGPKRYAGHYVVLCGYDMAAQKLFYHN
PEVHDGHICRCLIESMDTARRAYGTDEDIIFIYEKKETREASFLDH
BO31008.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13760-PC | 240 | CG13760-PC | 1..240 | 1..240 | 1313 | 100 | Plus |
CG13760-PD | 222 | CG13760-PD | 1..222 | 1..240 | 1177 | 92.5 | Plus |