Clone BO31008 Report

Search the DGRC for BO31008

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:310
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG13760-RC
Protein status:BO31008.pep: Imported from assembly
Sequenced Size:754

Clone Sequence Records

BO31008.complete Sequence

754 bp assembled on 2012-03-09

GenBank Submission: KX796677

> BO31008.complete
GAAGTTATCAGTCGACATGAACGGACTGCCGCCGAGCAAGCACTACAACC
TGACGCACTACCAGCAGCGCTACAACTGGGACTGCGGTCTGTCCTGCATC
ATTATGATCCTGTCGGCGCAGCAAAGGGAACAGCTTCTTGGGAACTTTGA
TGCCGTGTGCGGCGAGGAGGGATTTGGCTCGAGCACCTGGACCATCGACC
TGTGCTATCTGCTGATGCGCTACCAGGTGCGCCACGAGTACTTCACCCAA
ACGCTCGGGATCGATCCCAACTACGCGCAGCACACGTACTACTCCAAGAT
CATCGACAAGGACGAACGGCGCGTGACGCGCAAGTTCAAGGACGCCCGGG
CCCATGGACTGCGCGTTGAACAGCGCACCGTGGACATGGAGGTCATTCTG
CGGCATTTGGCCCGCCACGGACCCGTCATCCTGCTGACCAACGCCTCGCT
GCTCACGTGCGAGGTGTGCAAGCGCAATGTCCTAGAGAAGTTCGGCTGTT
TTCATATACCCTGCATTGCTCAAAATACACGCCTCCATGGACCCAAAAGG
TATGCCGGACACTATGTGGTGCTCTGCGGATATGACATGGCCGCCCAGAA
GCTCTTCTACCACAATCCCGAGGTCCACGATGGCCACATTTGTCGCTGCC
TCATCGAGTCCATGGACACGGCCCGACGCGCCTACGGCACGGACGAGGAC
ATCATTTTCATATACGAGAAGAAGGAAACTAGGGAGGCAAGCTTTCTAGA
CCAT

BO31008.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13760-RC 723 CG13760-PC 1..720 17..736 3600 100 Plus
CG13760-RD 669 CG13760-PD 1..479 17..495 2395 100 Plus
CG13760-RD 669 CG13760-PD 479..666 549..736 940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:05:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13760-RC 1524 CG13760-RC 255..974 17..736 3600 100 Plus
CG13760-RD 1389 CG13760-RD 174..652 17..495 2395 100 Plus
CG13760-RD 1389 CG13760-RD 652..839 549..736 940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2584667..2584939 495..223 1365 100 Minus
X 23542271 X 2584995..2585207 229..17 1065 100 Minus
X 23542271 X 2584463..2584603 635..495 705 100 Minus
X 23542271 X 2584295..2584395 736..636 505 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:05:29 has no hits.

BO31008.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:26 Download gff for BO31008.complete
Subject Subject Range Query Range Percent Splice Strand
CG13760-RC 255..974 17..738 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:05 Download gff for BO31008.complete
Subject Subject Range Query Range Percent Splice Strand
CG13760-RC 255..974 17..738 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:03:58 Download gff for BO31008.complete
Subject Subject Range Query Range Percent Splice Strand
CG13760-RC 255..974 17..738 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:03:58 Download gff for BO31008.complete
Subject Subject Range Query Range Percent Splice Strand
X 2584293..2584395 636..738 98 <- Minus
X 2584463..2584602 496..635 100 <- Minus
X 2584667..2584935 227..495 100 <- Minus
X 2584998..2585207 17..226 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:05 Download gff for BO31008.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2478326..2478428 636..738 98 <- Minus
arm_X 2478496..2478635 496..635 100 <- Minus
arm_X 2478700..2478968 227..495 100 <- Minus
arm_X 2479031..2479240 17..226 100   Minus

BO31008.pep Sequence

Translation from 16 to 754

> BO31008.pep
MNGLPPSKHYNLTHYQQRYNWDCGLSCIIMILSAQQREQLLGNFDAVCGE
EGFGSSTWTIDLCYLLMRYQVRHEYFTQTLGIDPNYAQHTYYSKIIDKDE
RRVTRKFKDARAHGLRVEQRTVDMEVILRHLARHGPVILLTNASLLTCEV
CKRNVLEKFGCFHIPCIAQNTRLHGPKRYAGHYVVLCGYDMAAQKLFYHN
PEVHDGHICRCLIESMDTARRAYGTDEDIIFIYEKKETREASFLDH

BO31008.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG13760-PC 240 CG13760-PC 1..240 1..240 1313 100 Plus
CG13760-PD 222 CG13760-PD 1..222 1..240 1177 92.5 Plus