Clone BO31021 Report

Search the DGRC for BO31021

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:310
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG30502-RB
Protein status:BO31021.pep: Imported from assembly
Sequenced Size:1099

Clone Sequence Records

BO31021.complete Sequence

1099 bp assembled on 2012-03-09

GenBank Submission: KX798767

> BO31021.complete
GAAGTTATCAGTCGACATGCCCATCGACATGGATATACCAAAGGAAGCGG
AGTCGAACGACAAGTTCATAGTAAAGTATCGCCAGCAGTATTACGATTTG
TCCAGGTTTATGCACAAGCATCCGGGAGGCATAAACACACTCAAAGGTCT
CAACAGCGGGGACATGACAGCTCGCTTCCTAAAGGCGCCGCCACATTCGG
ATGCGGCCATGTACTTGATGAGGGAGTACAAAATCGATCCAGAGGACTCT
CGGAAACCAAAGTCGAGCCAAAGGGAAACGTTGCATCACGATGAAGATGG
GACTTTGCGACAACGGCCCAGGGAAACGGAGGACAAGAACAATAACCAGG
TGGACGATAGTATGGAGCACCTAGTGGACTGGTCTAAGGCAATGCTTCCG
CAGATAGCTAACATAACGGATTGCTACGATGAGTGGGTTCACAAGCCGGT
GGACAGGCCACTGCGTCTCTTTGACCCTTGGTACTTGGAGATGTGCACCA
AGACGCCCTGGTGGCTGGTGCCCCTGTTCTGGATACCAGTGATCGTGAAA
TGCGCCGTGGAGGAGTTCACCACCGCCTGGCAGGATAGCAACCAGCTGGC
TGTGTTCTCCGGTTACTTTTTATTTGGCGTGCTCCTGTGGTCTTTCCTGG
AGTACACACTGCACCGCTGGGTGTTCCACGTGAAGCTGAGCAACAAGAGC
GGAAGTTGGCTATGCACCTTCCACTTCATGATCCATGGCCTGCACCACAA
GGTGCCCTTCGATCCGATGCGACTGGTGTTTCCGCCCCTTCCCGGCGCAG
TGCTCGCCGCGGTCATCTACACCCCGCTCAGCTTTGTCCTGTCCCATCCG
CGAGTGATCTTGTCTGGAGCTCTGGCCGGCTATCTGTGCTACGATATGAT
GCACTACTACCTGCACTATGGGAACCCTTCGCTATGGGCCTTTGTACACA
TGAAGCGCTATCATCACCACCACCACTTCTCGCACCAAACTCTCGGTTAC
GGCATCAGCAGTCCCTTGTGGGATGTCGTCTTCAAAACGAGAATCCATCT
CCGCAAGCTGAGATACCAACTGCGCTGGTCCGCAAGCTTTCTAGACCAT

BO31021.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
fa2h-RB 1068 CG30502-PB 1..1065 17..1081 5325 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:06:48
Subject Length Description Subject Range Query Range Score Percent Strand
fa2h-RB 1399 CG30502-RB 120..1184 17..1081 5325 100 Plus
CG11125-RC 2177 CG11125-RC 1600..1950 367..17 1755 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7446404..7446892 1081..593 2445 100 Minus
2R 25286936 2R 7449418..7449768 367..17 1755 100 Minus
2R 25286936 2R 7446954..7447183 595..366 1150 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:06:45 has no hits.

BO31021.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:29 Download gff for BO31021.complete
Subject Subject Range Query Range Percent Splice Strand
CG30502-RB 118..1182 17..1083 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:19 Download gff for BO31021.complete
Subject Subject Range Query Range Percent Splice Strand
fa2h-RB 120..1184 17..1083 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:04:27 Download gff for BO31021.complete
Subject Subject Range Query Range Percent Splice Strand
fa2h-RB 120..1184 17..1083 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:04:27 Download gff for BO31021.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7446400..7446889 596..1083 99 <- Minus
2R 7446954..7447181 368..595 100 <- Minus
2R 7449418..7449768 17..367 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:19 Download gff for BO31021.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3333905..3334394 596..1083 99 <- Minus
arm_2R 3334459..3334686 368..595 100 <- Minus
arm_2R 3336923..3337273 17..367 100   Minus

BO31021.pep Sequence

Translation from 16 to 1099

> BO31021.pep
MPIDMDIPKEAESNDKFIVKYRQQYYDLSRFMHKHPGGINTLKGLNSGDM
TARFLKAPPHSDAAMYLMREYKIDPEDSRKPKSSQRETLHHDEDGTLRQR
PRETEDKNNNQVDDSMEHLVDWSKAMLPQIANITDCYDEWVHKPVDRPLR
LFDPWYLEMCTKTPWWLVPLFWIPVIVKCAVEEFTTAWQDSNQLAVFSGY
FLFGVLLWSFLEYTLHRWVFHVKLSNKSGSWLCTFHFMIHGLHHKVPFDP
MRLVFPPLPGAVLAAVIYTPLSFVLSHPRVILSGALAGYLCYDMMHYYLH
YGNPSLWAFVHMKRYHHHHHFSHQTLGYGISSPLWDVVFKTRIHLRKLRY
QLRWSASFLDH

BO31021.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:29
Subject Length Description Subject Range Query Range Score Percent Strand
fa2h-PB 355 CG30502-PB 1..355 1..355 1982 100 Plus