BO31024.complete Sequence
265 bp assembled on 2012-03-09
GenBank Submission: KX796871
> BO31024.complete
GAAGTTATCAGTCGACATGTGTCATCCAAGTCTACTGATGTGGCGTATTT
ATTCCCTTAAGCCCACATCCAAATTCTTGGAGTTCAGGATCAAGAGGAGA
TACGGCCTGACTCGTTGGCATCCGCAGTTTGATTTGGAGAGCTGTCCCCT
TTGCCCCAGTCGCCCAATGTCGAGAAATTCTCCTCAGACAAGGCTATTCT
ATCTAACGCTTGTAGGCCAGGTTGAAGGCGAACAAACAAGTAAGTTCGCA
AGCTTTCTAGACCAT
BO31024.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:06:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dup-RB | 2232 | CG8171-PB | 1483..1554 | 139..210 | 225 | 87.5 | Plus |
dup-RA | 2232 | CG8171-PA | 1483..1554 | 139..210 | 225 | 87.5 | Plus |
dup-RB | 2232 | CG8171-PB | 1435..1475 | 107..147 | 175 | 95.1 | Plus |
dup-RA | 2232 | CG8171-PA | 1435..1475 | 107..147 | 175 | 95.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:06:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dup-RB | 2764 | CG8171-RB | 1698..1769 | 139..210 | 225 | 87.5 | Plus |
dup-RA | 3138 | CG8171-RA | 2072..2143 | 139..210 | 225 | 87.5 | Plus |
dup-RB | 2764 | CG8171-RB | 1650..1690 | 107..147 | 175 | 95.1 | Plus |
dup-RA | 3138 | CG8171-RA | 2024..2064 | 107..147 | 175 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:06:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15374998..15375228 | 247..17 | 1155 | 100 | Minus |
2R | 25286936 | 2R | 15374065..15374231 | 212..48 | 635 | 93.4 | Minus |
2R | 25286936 | 2R | 15375920..15375973 | 70..17 | 255 | 98.1 | Minus |
2R | 25286936 | 2R | 15377614..15377685 | 210..139 | 225 | 87.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:06:21 has no hits.
BO31024.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:28 Download gff for
BO31024.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43105-RA | 417..647 | 17..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 22:36:11 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 06:04:18 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:04:18 Download gff for
BO31024.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15374996..15375228 | 17..249 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:11 Download gff for
BO31024.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11262501..11262733 | 17..249 | 99 | | Minus |
BO31024.pep Sequence
Translation from 16 to 265
> BO31024.pep
MCHPSLLMWRIYSLKPTSKFLEFRIKRRYGLTRWHPQFDLESCPLCPSRP
MSRNSPQTRLFYLTLVGQVEGEQTSKFASFLDH
Sequence BO31024.pep has no blast hits.