Clone BO31024 Report

Search the DGRC for BO31024

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:310
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG43105-RA
Protein status:BO31024.pep: Imported from assembly
Sequenced Size:265

Clone Sequence Records

BO31024.complete Sequence

265 bp assembled on 2012-03-09

GenBank Submission: KX796871

> BO31024.complete
GAAGTTATCAGTCGACATGTGTCATCCAAGTCTACTGATGTGGCGTATTT
ATTCCCTTAAGCCCACATCCAAATTCTTGGAGTTCAGGATCAAGAGGAGA
TACGGCCTGACTCGTTGGCATCCGCAGTTTGATTTGGAGAGCTGTCCCCT
TTGCCCCAGTCGCCCAATGTCGAGAAATTCTCCTCAGACAAGGCTATTCT
ATCTAACGCTTGTAGGCCAGGTTGAAGGCGAACAAACAAGTAAGTTCGCA
AGCTTTCTAGACCAT

BO31024.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
dup-RB 2232 CG8171-PB 1483..1554 139..210 225 87.5 Plus
dup-RA 2232 CG8171-PA 1483..1554 139..210 225 87.5 Plus
dup-RB 2232 CG8171-PB 1435..1475 107..147 175 95.1 Plus
dup-RA 2232 CG8171-PA 1435..1475 107..147 175 95.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
dup-RB 2764 CG8171-RB 1698..1769 139..210 225 87.5 Plus
dup-RA 3138 CG8171-RA 2072..2143 139..210 225 87.5 Plus
dup-RB 2764 CG8171-RB 1650..1690 107..147 175 95.1 Plus
dup-RA 3138 CG8171-RA 2024..2064 107..147 175 95.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15374998..15375228 247..17 1155 100 Minus
2R 25286936 2R 15374065..15374231 212..48 635 93.4 Minus
2R 25286936 2R 15375920..15375973 70..17 255 98.1 Minus
2R 25286936 2R 15377614..15377685 210..139 225 87.5 Minus
Blast to na_te.dros performed on 2014-11-28 05:06:21 has no hits.

BO31024.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:28 Download gff for BO31024.complete
Subject Subject Range Query Range Percent Splice Strand
CG43105-RA 417..647 17..249 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 22:36:11 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 06:04:18 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:04:18 Download gff for BO31024.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15374996..15375228 17..249 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:11 Download gff for BO31024.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11262501..11262733 17..249 99   Minus

BO31024.pep Sequence

Translation from 16 to 265

> BO31024.pep
MCHPSLLMWRIYSLKPTSKFLEFRIKRRYGLTRWHPQFDLESCPLCPSRP
MSRNSPQTRLFYLTLVGQVEGEQTSKFASFLDH
Sequence BO31024.pep has no blast hits.