BO31032.complete Sequence
2359 bp assembled on 2012-04-11
GenBank Submission: KX798539
> BO31032.complete
GAAGTTATCAGTCGACATGCTGATATCAACTATTTCCACAGACTCCGCGA
TGGCGGCCACAAACAACGATGGTGGCACGCAGCCGAATGCCGTGGCGGCA
TGGGGTGCTCCGGCCAATGGACCCCGGAACACACAGGCCGCCGTATCCGT
GCGGCATGCCTTCAAGGCGTACGGAAAGAAGAAGAACGCCAACCAGGTGC
TGAACAACCTGAACATGACCGTGCCCAAGGGAACAATCTATGGTCTTCTG
GGAGCCTCCGGATGTGGCAAGACCACCCTGCTCTCCTGCATCGTTGGACG
TCGTTACATGGACGCCGGTGAGATCTTTGTGCTGGGCGGCAAGCCCGGCA
CTAGGGGATCAGGTGTTCCCGGAAAGCGTGTGGGCTACATGCCCCAGGAG
ATCGCACTGTACGGAGAGTTCTCCATCCAGGAGACCATGATGTACTTCGG
CTGGATCTTCGGCATGGATACCAAGGAGATCCTGGAACGTCTACAGTTCC
TGCTCAACTTCCTTGATCTGCCGTCGGAGAAGCGACTGGTGAAGAATCTC
AGTGGTGGTCAGCAGCGTCGTGTGAGTTTCGCTGTGGCCTTGATGCACGA
TCCAGAATTGCTGATCCTGGACGAACCCACCGTGGGTGTGGATCCACTGC
TGCGTCAGAGCATCTGGAATCACCTGGTGCACATCACCAAGGCGGGCCAA
AAGACGGTCATTATTACCACACATTATATTGAAGAGGCACGACAGGCGCA
TACGATCGGTCTGATGCGGTCGGGTCACCTGCTGGCCGAGGAGTCACCCA
GCGTCCTGCTCTCCATCTACAAGTGCATCAGCCTGGAGGAGGTATTCCTC
AAGCTGTCCCGCATCCAAAGCCAAAAGGGCGATGTGACCCACGTGAACTT
CAGTAACAACATCTCGTTGCACGCCATGGCCTTTGGCAGCAAGATGGACA
AGCCGAGTTCCAGCCAGGAGGGCGGCGTGGTGGGCCTCAACTTCCACCAG
AGCAAGGAGGTGCTCATTAACGACAGCAATGGCTCCATCTACACGCTCAA
CCAGGAACCCTACAGTCCGCCGCCGTCCCGGCGCAACAATAATCCCAATG
ATGAGGAGAGCTGCCAGGACTGCTATTCCAACCTGTGCAAGATCACCTCC
AAGGGCAAGATTCGCGCCCTGCTCACCAAGAACATGCTCCGCATGTGGCG
CAACGTGGGCGTCATGCTCTTCATCTTCGCCCTGCCCGTCATGCAGGTGA
TCCTTTTCTGCTTGGCCATCGGACGAGATCCTCAGGGCCTTAACCTGGCC
ATAGTCAACGGAGAGATGAACGACACGGAAAACTGCTATTGGGAGGATGG
ATGCCACTTCAAGAACCTGGGATGTCGTTATCTGAGTCATTTGAATACGA
GCGTAGTTAAAACATATTATGAGGACCTGGACGATGCCAAAGAGGCCGTG
AGAAAGGGCACAGCTTGGGGGGCGGTCTACATCAGCGAGAACTTCACGGA
CGCCTTTATTGCCCGAGCTAATTTGGGACGTGACTCCGACGACGAAACGA
TCGACTCCTCCGAGGTCAAGGTCTGGCTGGACATGTCCAACCAGCAGATC
GGCGTCATGCTCAATCGGGACATCCAGTTGGCCTTCAGGGACTTCGCCAT
GGGCCTTCTCGGCCAGTGCGGCAGCAATCCGAAATTGGGCGACGTGCCCA
TTCAGTTCAGGGACCCCATCTACGGCACCATGAATCCATCGTTCACCGAT
TTCGTGGCACCTGGCGTGATCTTGACCATTGTATTCTTCTTGGCTGTCGC
TTTGACGTCATCGGCTCTGATCATTGAGCGCACTGAGGGCTTGTTGGATC
GCTCCTGGGTGGCTGGCGTCTCGCCCTTCGAGATTCTATTCTCGCACGTG
ATCACCCAGTTCGTGGTGATGTGCGGACAGACCACTCTGGTGTTGATCTT
CATGCTGGTGGTGTTCGGGGTTACCAACAACGGCGACCTATTCTGGGTCA
TCGTGCTGACCCTGTTGCAGGGCATGTGTGGAATGTGCTTTGGCTTCCTC
ATCTCCTCGGTGTGCGAGCTGGAGAGGAATGCCATACAGCTGGCGCTGGG
CTCCTTCTATCCCACCCTGCTGCTGTCTGGAGTGATCTGGCCGATTGAGG
GCATGCCCGTGGTGCTGAGATACATATCACTGTGCCTGCCACTAACGCTA
GCCACCTCTTCGCTGCGCTCCATCCTCACACGTGGCTGGGCGATACTGGA
GTCGGATGTGTACATCGGCTATGTGAGCACGCTGTCCTGGATTGTGGGCT
TCCTGGTGCTGACGCTTCTCGTGCTGCGAGCCAAACGCGGCGCAAGCTTT
CTAGACCAT
BO31032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9990-RF | 2328 | CG9990-PF | 1..2325 | 17..2341 | 11625 | 100 | Plus |
| CG9990-RB | 2334 | CG9990-PB | 1..2331 | 17..2341 | 11530 | 99.7 | Plus |
| CG9990-RG | 2295 | CG9990-PG | 1..2292 | 50..2341 | 11460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:47:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9990-RF | 3555 | CG9990-RF | 447..2771 | 17..2341 | 11625 | 100 | Plus |
| CG9990-RG | 3586 | CG9990-RG | 492..2802 | 31..2341 | 11555 | 100 | Plus |
| CG9990-RB | 3802 | CG9990-RB | 688..3018 | 17..2341 | 11530 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:47:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28692244..28692760 | 238..754 | 2585 | 100 | Plus |
| 3R | 32079331 | 3R | 28693953..28694402 | 1327..1776 | 2250 | 100 | Plus |
| 3R | 32079331 | 3R | 28694591..28694924 | 1836..2169 | 1670 | 100 | Plus |
| 3R | 32079331 | 3R | 28693339..28693622 | 1045..1328 | 1420 | 100 | Plus |
| 3R | 32079331 | 3R | 28690211..28690417 | 31..237 | 1035 | 100 | Plus |
| 3R | 32079331 | 3R | 28694982..28695155 | 2168..2341 | 870 | 100 | Plus |
| 3R | 32079331 | 3R | 28692821..28692970 | 754..903 | 750 | 100 | Plus |
| 3R | 32079331 | 3R | 28693134..28693277 | 902..1045 | 720 | 100 | Plus |
| 3R | 32079331 | 3R | 28694466..28694527 | 1777..1838 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:47:18 has no hits.
BO31032.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-11 12:37:46 Download gff for
BO31032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9990-RF | 447..2771 | 17..2343 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:09 Download gff for
BO31032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9990-RF | 447..2771 | 17..2343 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:37:00 Download gff for
BO31032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9990-RF | 447..2771 | 17..2343 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:37:00 Download gff for
BO31032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28694593..28694924 | 1838..2169 | 100 | -> | Plus |
| 3R | 28694984..28695155 | 2170..2343 | 98 | | Plus |
| 3R | 28690211..28690417 | 31..237 | 100 | -> | Plus |
| 3R | 28692244..28692760 | 238..754 | 100 | -> | Plus |
| 3R | 28692822..28692970 | 755..903 | 100 | -> | Plus |
| 3R | 28693136..28693277 | 904..1045 | 100 | -> | Plus |
| 3R | 28693340..28693621 | 1046..1327 | 100 | -> | Plus |
| 3R | 28693954..28694402 | 1328..1776 | 100 | -> | Plus |
| 3R | 28694466..28694526 | 1777..1837 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:09 Download gff for
BO31032.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24515933..24516139 | 31..237 | 100 | -> | Plus |
| arm_3R | 24517966..24518482 | 238..754 | 100 | -> | Plus |
| arm_3R | 24518544..24518692 | 755..903 | 100 | -> | Plus |
| arm_3R | 24518858..24518999 | 904..1045 | 100 | -> | Plus |
| arm_3R | 24519062..24519343 | 1046..1327 | 100 | -> | Plus |
| arm_3R | 24519676..24520124 | 1328..1776 | 100 | -> | Plus |
| arm_3R | 24520188..24520248 | 1777..1837 | 100 | -> | Plus |
| arm_3R | 24520315..24520646 | 1838..2169 | 100 | -> | Plus |
| arm_3R | 24520706..24520877 | 2170..2343 | 98 | | Plus |
BO31032.pep Sequence
Translation from 16 to 2359
> BO31032.pep
MLISTISTDSAMAATNNDGGTQPNAVAAWGAPANGPRNTQAAVSVRHAFK
AYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDA
GEIFVLGGKPGTRGSGVPGKRVGYMPQEIALYGEFSIQETMMYFGWIFGM
DTKEILERLQFLLNFLDLPSEKRLVKNLSGGQQRRVSFAVALMHDPELLI
LDEPTVGVDPLLRQSIWNHLVHITKAGQKTVIITTHYIEEARQAHTIGLM
RSGHLLAEESPSVLLSIYKCISLEEVFLKLSRIQSQKGDVTHVNFSNNIS
LHAMAFGSKMDKPSSSQEGGVVGLNFHQSKEVLINDSNGSIYTLNQEPYS
PPPSRRNNNPNDEESCQDCYSNLCKITSKGKIRALLTKNMLRMWRNVGVM
LFIFALPVMQVILFCLAIGRDPQGLNLAIVNGEMNDTENCYWEDGCHFKN
LGCRYLSHLNTSVVKTYYEDLDDAKEAVRKGTAWGAVYISENFTDAFIAR
ANLGRDSDDETIDSSEVKVWLDMSNQQIGVMLNRDIQLAFRDFAMGLLGQ
CGSNPKLGDVPIQFRDPIYGTMNPSFTDFVAPGVILTIVFFLAVALTSSA
LIIERTEGLLDRSWVAGVSPFEILFSHVITQFVVMCGQTTLVLIFMLVVF
GVTNNGDLFWVIVLTLLQGMCGMCFGFLISSVCELERNAIQLALGSFYPT
LLLSGVIWPIEGMPVVLRYISLCLPLTLATSSLRSILTRGWAILESDVYI
GYVSTLSWIVGFLVLTLLVLRAKRGASFLDH
BO31032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9990-PF | 775 | CG9990-PF | 1..775 | 1..775 | 4019 | 100 | Plus |
| CG9990-PB | 777 | CG9990-PB | 1..777 | 1..775 | 4006 | 99.7 | Plus |
| CG9990-PA | 808 | CG9990-PA | 37..808 | 6..775 | 3984 | 99.7 | Plus |
| CG9990-PG | 764 | CG9990-PG | 1..764 | 12..775 | 3970 | 100 | Plus |
| CG9990-PE | 766 | CG9990-PE | 1..766 | 12..775 | 3957 | 99.7 | Plus |
