BO31043.complete Sequence
670 bp assembled on 2012-04-24
GenBank Submission: KX795356
> BO31043.complete
GAAGTTATCAGTCGACATGGAGAACGTTTCCAAGATTTGGCTGGGTCCCC
TGCCCCAGGATTCGCCGTACGTAAAGCCCTTCCGGCTGTACTACGTCCAG
AATGGCGTGGAGAAGAACTGGGACCTGCTGAAGGTCCACGATAGTGTGGC
TATTATCTTGTACAACACTTCTCGCCAGAAACTGGTCCTGGTCCGCCAGT
TCCGACCCGCCGTCTACCACGGCATCATCTCCAGCGCCAAGGGCACCTTC
GATGAGGTGGACCTCAAGGAGTTCCCGCCCGCCATCGGTGTCACCTTGGA
ACTGTGCGCCGGCATCGTGGACAAAAACAAAAGCTGGGTGGAAATCGCTC
GGGAGGAAGTGGTCGAGGAGTGTGGCTACGATGTGCCCGTGGAACGCATT
GAGGAAGTCATGGTCTACAGATCTGGAGTTGGTTCATCGGGTGCCAAGCA
GACCATGTACTACTGCGAGGTGACCGATGCGGACAAGGCCACAGGTGGTG
GCGGCGTCGACGACGAGATCATCGAGGTGGTGGAGCTGTCCCTGGAGGAG
GCCAAGCGGATGATCCAACAGGGAGCCGTCAACAACAGCCCGCCCAGCTG
CCTGATGGGCCTGATGTGGTTCTTCGCCAACAGGGCACCCGGTGCGAAGG
CCGCAAGCTTTCTAGACCAT
BO31043.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:15:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42813-RA | 639 | CG42813-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
| CG42813-RB | 639 | CG42813-PB | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:15:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42813-RA | 957 | CG31063-RA | 51..687 | 16..652 | 3185 | 100 | Plus |
| CG42813-RB | 1366 | CG42813-RB | 90..726 | 16..652 | 3185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:15:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27228068..27228472 | 420..16 | 2025 | 100 | Minus |
| 3R | 32079331 | 3R | 27227710..27227944 | 652..418 | 1175 | 100 | Minus |
| 3L | 28110227 | 3L | 15100462..15100643 | 599..418 | 685 | 91.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:15:09 has no hits.
BO31043.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:02:22 Download gff for
BO31043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42813-RA | 52..687 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:14 Download gff for
BO31043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42813-RA | 52..687 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:06:59 Download gff for
BO31043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42813-RB | 91..726 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:06:59 Download gff for
BO31043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27228068..27228471 | 17..420 | 100 | | Minus |
| 3R | 27227708..27227941 | 421..654 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:14 Download gff for
BO31043.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23053430..23053663 | 421..654 | 99 | <- | Minus |
| arm_3R | 23053790..23054193 | 17..420 | 100 | | Minus |
BO31043.pep Sequence
Translation from 16 to 670
> BO31043.pep
MENVSKIWLGPLPQDSPYVKPFRLYYVQNGVEKNWDLLKVHDSVAIILYN
TSRQKLVLVRQFRPAVYHGIISSAKGTFDEVDLKEFPPAIGVTLELCAGI
VDKNKSWVEIAREEVVEECGYDVPVERIEEVMVYRSGVGSSGAKQTMYYC
EVTDADKATGGGGVDDEIIEVVELSLEEAKRMIQQGAVNNSPPSCLMGLM
WFFANRAPGAKAASFLDH
BO31043.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42813-PA | 212 | CG31063-PA | 1..212 | 1..212 | 1108 | 100 | Plus |
| CG42813-PB | 212 | CG42813-PB | 1..212 | 1..212 | 1108 | 100 | Plus |
| CG42814-PA | 237 | CG31063-PA | 27..233 | 4..208 | 641 | 54.6 | Plus |
