Clone BO31061 Report

Search the DGRC for BO31061

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:310
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptCG5674-RB
Protein status:BO31061.pep: Imported from assembly
Sequenced Size:490

Clone Sequence Records

BO31061.complete Sequence

490 bp assembled on 2012-03-09

GenBank Submission: KX797169

> BO31061.complete
GAAGTTATCAGTCGACATGGAAACGGCCAGAATGGAGACGGCGATGGAGA
CACATTTTATGGCCAAAATGGGGAAGTGGATGACCCCTGAGGAGGAGGCG
CGTCAAAAGTTCATCATGAGGGAGCGGGACCGCGAGCGGAAACGGATCAA
GCGCATGAATCCCGAGTACAGGCAGATGGAACGAGAGCGGGATCGGTTCC
GCAAGCTGACACCCAGGCCCAGTCTGATGACCCCCGAGGAGGAGGCCCGC
CACAAGTTCATCATGCGGGAGCGGGATCGCGAGAGGAAGCGGATCAAGCG
CCTCAATCCCGAGTACCGGCGAATGGAACGCGAGCGCGATCGATTCCGCA
AGAAGGCACGACGTGCTAACGTAGCATTTTTCCAATATTCTATATTATCT
ATAAACATAATCCCACACTCGAACACTCGATTCACACGACACACACACAC
ACACTCACATGGCTTGAGAGATGCAAGCTTTCTAGACCAT

BO31061.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG5674-RB 459 CG5674-PB 1..456 17..472 2280 100 Plus
CG5674-RA 1470 CG5674-PA 1..339 17..355 1695 100 Plus
CG5674-RE 1338 CG5674-PE 1..297 17..316 1075 91.3 Plus
CG5674-RB 459 CG5674-PB 63..189 226..352 395 87.4 Plus
CG5674-RB 459 CG5674-PB 210..336 79..205 395 87.4 Plus
CG5674-RA 1470 CG5674-PA 63..189 226..352 395 87.4 Plus
CG5674-RA 1470 CG5674-PA 210..336 79..205 395 87.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:09:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG5674-RB 3371 CG5674-RB 168..623 17..472 2280 100 Plus
CG5674-RA 3112 CG5674-RA 168..506 17..355 1695 100 Plus
CG5674-RE 2980 CG5674-RE 168..464 17..316 1075 91.3 Plus
CG5674-RB 3371 CG5674-RB 230..356 226..352 395 87.4 Plus
CG5674-RB 3371 CG5674-RB 377..503 79..205 395 87.4 Plus
CG5674-RA 3112 CG5674-RA 230..356 226..352 395 87.4 Plus
CG5674-RA 3112 CG5674-RA 377..503 79..205 395 87.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17971872..17972120 224..472 1245 100 Plus
2L 23513712 2L 17969370..17969518 75..223 745 100 Plus
2L 23513712 2L 17969374..17969500 226..352 395 87.4 Plus
2L 23513712 2L 17971874..17972000 79..205 395 87.4 Plus
2L 23513712 2L 17963546..17963605 17..76 300 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:09:33 has no hits.

BO31061.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:31 Download gff for BO31061.complete
Subject Subject Range Query Range Percent Splice Strand
CG5674-RB 209..664 17..474 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:35 Download gff for BO31061.complete
Subject Subject Range Query Range Percent Splice Strand
CG5674-RB 168..623 17..474 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:05:10 Download gff for BO31061.complete
Subject Subject Range Query Range Percent Splice Strand
CG5674-RB 168..623 17..474 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:05:10 Download gff for BO31061.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17963546..17963605 17..76 100 -> Plus
2L 17969372..17969518 77..223 100 -> Plus
2L 17971872..17972120 224..474 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:35 Download gff for BO31061.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17963546..17963605 17..76 100 -> Plus
arm_2L 17969372..17969518 77..223 100 -> Plus
arm_2L 17971872..17972120 224..474 99   Plus

BO31061.pep Sequence

Translation from 16 to 490

> BO31061.pep
METARMETAMETHFMAKMGKWMTPEEEARQKFIMRERDRERKRIKRMNPE
YRQMERERDRFRKLTPRPSLMTPEEEARHKFIMRERDRERKRIKRLNPEY
RRMERERDRFRKKARRANVAFFQYSILSINIIPHSNTRFTRHTHTHSHGL
RDASFLDH

BO31061.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG5674-PB 152 CG5674-PB 1..152 1..152 800 100 Plus
CG5674-PA 489 CG5674-PA 1..113 1..113 592 100 Plus
CG5674-PE 445 CG5674-PE 1..122 1..123 561 90.2 Plus
CG5674-PD 396 CG5674-PD 1..87 1..116 276 51.7 Plus
CG5674-PA 489 CG5674-PA 112..180 20..116 188 42.3 Plus