BO31069.complete Sequence
997 bp assembled on 2012-03-09
GenBank Submission: KX796466
> BO31069.complete
GAAGTTATCAGTCGACATGTACATCACAACGGGCAAAACGTTTGCGGTGC
TGAAAGGACCTTTACGTGATTGTTTTTTTCTTAGTAAGAGATGGCCAGCT
GTTCAACAACTGCACTTAAGTGTCGCAATGGGAAATTATGTGAATGAAGC
CTCAATTCCCCTTCCAATCAATGTGGACTCTGCGGAAACAACTCGATTCT
CCCCCCAGCGCTCGCGTGACATTTCGTCTACAGTGATTAATGCACAAGCA
CCAATCTCAAGCATTGATATCACAACTGACAACAGTTTTCATGCAGTCCT
AAGCGATCCAAATATTTGTCAAGATCCACATGTACAGTCCTATGATTGTT
TCGGGTTGATCAGTCTTAATTCCGCGATGCAAAGCAATGTACCAACACCG
TTTGGGGGGCTTAACAAGTTTTCTCATCTGAACATGCCTGGCGGACAATG
GTCCCAGGAATTCAAGTTTACAGCGCAAAACATGCAGTGCTCTCACTACA
GCGGTCTTCGCGAAAGTTTGCGAGCGGATTGGGCGACTTACGATCAGAAT
GCTACTCTTAAAACGAATGACCAAGGGTTGTTTAATCGAAGATATTATAG
CACCCAATCACCTATGCAAAACTCTTCCACAAAAACACCTACAGGTGCAA
AACTAAGTAAAAGTGAGCAGCTGAAGAGGGCATTTAAGGAATATGGAGCG
CCAATTGTTGCGTTTCACGTAGGAATTTCACTGATTTCTCTTGCCGGTTT
CTATGTGCTTGTATCAAGTGGCATAAACTTGGTCCCAGCTCTGGAGTGTA
TTGGAATTGCATCACCCGCTATTGTAGAAAAAGTGGCAACGGGGAGCACC
TTTGTTGTTGCGTATGCCGTACACAAAGTCTTTGCCCCTGCTAGAATAAG
TATCACGTTAGGTTCTGTGCCATTTGTTGTACGCTATATTCGATCTAAGA
AATCGCAAATACCAAAGCCAAAAAATACTGCAAGCTTTCTAGACCAT
BO31069.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:10:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17508-RA | 966 | CG17508-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
CG17508-RB | 585 | CG17508-PB | 1..560 | 17..576 | 2800 | 100 | Plus |
CG15403-RA | 603 | CG15403-PA | 281..533 | 654..906 | 320 | 75.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:10:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17508-RA | 1228 | CG17508-RA | 82..1044 | 17..979 | 4815 | 100 | Plus |
CG17508-RB | 1145 | CG17508-RB | 82..641 | 17..576 | 2800 | 100 | Plus |
CG15403-RA | 855 | CG15403-RA | 411..663 | 654..906 | 320 | 75.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:10:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5609011..5609490 | 97..576 | 2400 | 100 | Plus |
2R | 25286936 | 2R | 5611190..5611402 | 767..979 | 1065 | 100 | Plus |
2R | 25286936 | 2R | 5610062..5610256 | 574..768 | 975 | 100 | Plus |
2R | 25286936 | 2R | 5608716..5608797 | 17..98 | 410 | 100 | Plus |
2L | 23513712 | 2L | 3129045..3129297 | 654..906 | 320 | 75.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:10:30 has no hits.
BO31069.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:32 Download gff for
BO31069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17508-RA | 93..1055 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:43 Download gff for
BO31069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17508-RA | 82..1044 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:05:29 Download gff for
BO31069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17508-RA | 82..1044 | 17..981 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:05:29 Download gff for
BO31069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5608716..5608797 | 17..98 | 100 | -> | Plus |
2R | 5609013..5609489 | 99..575 | 100 | -> | Plus |
2R | 5610064..5610256 | 576..768 | 100 | -> | Plus |
2R | 5611192..5611402 | 769..981 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:43 Download gff for
BO31069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 1497569..1497761 | 576..768 | 100 | -> | Plus |
arm_2R | 1498697..1498907 | 769..981 | 99 | | Plus |
arm_2R | 1496221..1496302 | 17..98 | 100 | -> | Plus |
arm_2R | 1496518..1496994 | 99..575 | 100 | -> | Plus |
BO31069.pep Sequence
Translation from 16 to 997
> BO31069.pep
MYITTGKTFAVLKGPLRDCFFLSKRWPAVQQLHLSVAMGNYVNEASIPLP
INVDSAETTRFSPQRSRDISSTVINAQAPISSIDITTDNSFHAVLSDPNI
CQDPHVQSYDCFGLISLNSAMQSNVPTPFGGLNKFSHLNMPGGQWSQEFK
FTAQNMQCSHYSGLRESLRADWATYDQNATLKTNDQGLFNRRYYSTQSPM
QNSSTKTPTGAKLSKSEQLKRAFKEYGAPIVAFHVGISLISLAGFYVLVS
SGINLVPALECIGIASPAIVEKVATGSTFVVAYAVHKVFAPARISITLGS
VPFVVRYIRSKKSQIPKPKNTASFLDH
BO31069.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17508-PA | 321 | CG17508-PA | 1..321 | 1..321 | 1659 | 100 | Plus |
CG17508-PB | 194 | CG17508-PB | 1..187 | 1..187 | 993 | 100 | Plus |
CG15403-PA | 200 | CG15403-PA | 53..200 | 164..321 | 421 | 60.1 | Plus |