Clone BO31069 Report

Search the DGRC for BO31069

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:310
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG17508-RA
Protein status:BO31069.pep: Imported from assembly
Sequenced Size:997

Clone Sequence Records

BO31069.complete Sequence

997 bp assembled on 2012-03-09

GenBank Submission: KX796466

> BO31069.complete
GAAGTTATCAGTCGACATGTACATCACAACGGGCAAAACGTTTGCGGTGC
TGAAAGGACCTTTACGTGATTGTTTTTTTCTTAGTAAGAGATGGCCAGCT
GTTCAACAACTGCACTTAAGTGTCGCAATGGGAAATTATGTGAATGAAGC
CTCAATTCCCCTTCCAATCAATGTGGACTCTGCGGAAACAACTCGATTCT
CCCCCCAGCGCTCGCGTGACATTTCGTCTACAGTGATTAATGCACAAGCA
CCAATCTCAAGCATTGATATCACAACTGACAACAGTTTTCATGCAGTCCT
AAGCGATCCAAATATTTGTCAAGATCCACATGTACAGTCCTATGATTGTT
TCGGGTTGATCAGTCTTAATTCCGCGATGCAAAGCAATGTACCAACACCG
TTTGGGGGGCTTAACAAGTTTTCTCATCTGAACATGCCTGGCGGACAATG
GTCCCAGGAATTCAAGTTTACAGCGCAAAACATGCAGTGCTCTCACTACA
GCGGTCTTCGCGAAAGTTTGCGAGCGGATTGGGCGACTTACGATCAGAAT
GCTACTCTTAAAACGAATGACCAAGGGTTGTTTAATCGAAGATATTATAG
CACCCAATCACCTATGCAAAACTCTTCCACAAAAACACCTACAGGTGCAA
AACTAAGTAAAAGTGAGCAGCTGAAGAGGGCATTTAAGGAATATGGAGCG
CCAATTGTTGCGTTTCACGTAGGAATTTCACTGATTTCTCTTGCCGGTTT
CTATGTGCTTGTATCAAGTGGCATAAACTTGGTCCCAGCTCTGGAGTGTA
TTGGAATTGCATCACCCGCTATTGTAGAAAAAGTGGCAACGGGGAGCACC
TTTGTTGTTGCGTATGCCGTACACAAAGTCTTTGCCCCTGCTAGAATAAG
TATCACGTTAGGTTCTGTGCCATTTGTTGTACGCTATATTCGATCTAAGA
AATCGCAAATACCAAAGCCAAAAAATACTGCAAGCTTTCTAGACCAT

BO31069.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:10:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG17508-RA 966 CG17508-PA 1..963 17..979 4815 100 Plus
CG17508-RB 585 CG17508-PB 1..560 17..576 2800 100 Plus
CG15403-RA 603 CG15403-PA 281..533 654..906 320 75.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:10:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG17508-RA 1228 CG17508-RA 82..1044 17..979 4815 100 Plus
CG17508-RB 1145 CG17508-RB 82..641 17..576 2800 100 Plus
CG15403-RA 855 CG15403-RA 411..663 654..906 320 75.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5609011..5609490 97..576 2400 100 Plus
2R 25286936 2R 5611190..5611402 767..979 1065 100 Plus
2R 25286936 2R 5610062..5610256 574..768 975 100 Plus
2R 25286936 2R 5608716..5608797 17..98 410 100 Plus
2L 23513712 2L 3129045..3129297 654..906 320 75.1 Plus
Blast to na_te.dros performed on 2014-11-28 05:10:30 has no hits.

BO31069.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:32 Download gff for BO31069.complete
Subject Subject Range Query Range Percent Splice Strand
CG17508-RA 93..1055 17..981 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:43 Download gff for BO31069.complete
Subject Subject Range Query Range Percent Splice Strand
CG17508-RA 82..1044 17..981 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:05:29 Download gff for BO31069.complete
Subject Subject Range Query Range Percent Splice Strand
CG17508-RA 82..1044 17..981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:05:29 Download gff for BO31069.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5608716..5608797 17..98 100 -> Plus
2R 5609013..5609489 99..575 100 -> Plus
2R 5610064..5610256 576..768 100 -> Plus
2R 5611192..5611402 769..981 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:43 Download gff for BO31069.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1497569..1497761 576..768 100 -> Plus
arm_2R 1498697..1498907 769..981 99   Plus
arm_2R 1496221..1496302 17..98 100 -> Plus
arm_2R 1496518..1496994 99..575 100 -> Plus

BO31069.pep Sequence

Translation from 16 to 997

> BO31069.pep
MYITTGKTFAVLKGPLRDCFFLSKRWPAVQQLHLSVAMGNYVNEASIPLP
INVDSAETTRFSPQRSRDISSTVINAQAPISSIDITTDNSFHAVLSDPNI
CQDPHVQSYDCFGLISLNSAMQSNVPTPFGGLNKFSHLNMPGGQWSQEFK
FTAQNMQCSHYSGLRESLRADWATYDQNATLKTNDQGLFNRRYYSTQSPM
QNSSTKTPTGAKLSKSEQLKRAFKEYGAPIVAFHVGISLISLAGFYVLVS
SGINLVPALECIGIASPAIVEKVATGSTFVVAYAVHKVFAPARISITLGS
VPFVVRYIRSKKSQIPKPKNTASFLDH

BO31069.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG17508-PA 321 CG17508-PA 1..321 1..321 1659 100 Plus
CG17508-PB 194 CG17508-PB 1..187 1..187 993 100 Plus
CG15403-PA 200 CG15403-PA 53..200 164..321 421 60.1 Plus