Clone BO31082 Report

Search the DGRC for BO31082

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:310
Well:82
Vector:pDNR-Dual
Associated Gene/Transcriptcid-RA
Protein status:BO31082.pep: Imported from assembly
Sequenced Size:709

Clone Sequence Records

BO31082.complete Sequence

709 bp assembled on 2012-03-09

GenBank Submission: KX795403

> BO31082.complete
GAAGTTATCAGTCGACATGCCACGACACAGCAGAGCCAAGCGCGCACCCA
GGCCGTCGGCGAACAACTCAAAGTCGCCGAACGACGACGACACGGCCTTC
CGCTCGCCGGAGCCAGAAGACGGCACCGACTACGGCCTCGAATTCACCAC
CAGCCAACTGACGCTTCAGGACAACAATCGGCGTTCCTCGACGTTGCGCA
GGGACGCCGGACGGAGGCAGCCGGCAGCGAGAGACAGCTCCACCAGTGGC
GAGGAGGAGGACCAGGAGAATCGCTATCCCACAACCAGATCGCCGCAGAC
GCGTCGAATGACCGTGCAGCAGGAAAGCAAAACGCGAGCAGCAGGGCCAG
TTGCTGCGCAAAACCAGACCAGGCGGCGCAAAGCGGCCAATCCCATGAGC
AGAGCCAAGAGAATGGATCGTGAGATCCGGCGACTGCAGCACCATCCCGG
CACACTGATACCCAAGCTGCCGTTCTCGCGTCTAGTGCGCGAGTTCATCG
TGAAGTACAGCGACGACGAGCCGCTAAGGGTCACCGAAGGCGCCCTATTG
GCCATGCAGGAGTCGTGCGAGATGTACTTGACGCAGCGGCTCGCCGACTC
CTACATGCTAACCAAGCATCGCAATCGCGTCACACTGGAGGTGCGCGACA
TGGCATTGATGGCCTACATCTGCGACCGGGGTCGGCAATTTGCAAGCTTT
CTAGACCAT

BO31082.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
cid-RA 678 CG13329-PA 1..675 17..691 3375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:10:43
Subject Length Description Subject Range Query Range Score Percent Strand
cid-RA 1015 CG13329-RA 75..749 17..691 3375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13485691..13486365 17..691 3375 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:10:41 has no hits.

BO31082.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:33 Download gff for BO31082.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 91..765 17..693 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:47 Download gff for BO31082.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 75..749 17..693 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:05:32 Download gff for BO31082.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 75..749 17..693 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:05:32 Download gff for BO31082.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13485691..13486365 17..693 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:47 Download gff for BO31082.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9373196..9373870 17..693 99   Plus

BO31082.pep Sequence

Translation from 16 to 709

> BO31082.pep
MPRHSRAKRAPRPSANNSKSPNDDDTAFRSPEPEDGTDYGLEFTTSQLTL
QDNNRRSSTLRRDAGRRQPAARDSSTSGEEEDQENRYPTTRSPQTRRMTV
QQESKTRAAGPVAAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPK
LPFSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTK
HRNRVTLEVRDMALMAYICDRGRQFASFLDH

BO31082.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:50
Subject Length Description Subject Range Query Range Score Percent Strand
cid-PA 225 CG13329-PA 1..225 1..225 1160 100 Plus