Clone BO31090 Report

Search the DGRC for BO31090

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:310
Well:90
Vector:pDNR-Dual
Associated Gene/TranscriptCG12895-RA
Protein status:BO31090.pep: Imported from assembly
Sequenced Size:502

Clone Sequence Records

BO31090.complete Sequence

502 bp assembled on 2012-03-09

GenBank Submission: KX796500

> BO31090.complete
GAAGTTATCAGTCGACATGTTGCGGCAATTTATAGTATCTACGGTAGGCC
GTCGCCTGCAACTACCTATGATGGCCCAAAGTCGCCTCGCCAGCAATTTG
GACAAAACTGAGTACACAACACCCGGGGAAATTGTGGACTACGATGATCC
GCCGCATTTGCCAGTTCCGGAATATCCTGTCCGTCCCGATGAGCCGCTGG
AAACTCGCAAGCAGCGCCTTTTGTATCAAAGCAGGAAACGCGGAATGCTG
GAAAACGATCTCTTGCTGAGCACTTTTGTGGCCAAGCATTTGAAGGACTT
CAATGCCGAGCAGACCGCCGAGTACGATCAGTTGATCAATGGTGTCAGCA
ACGACTGGGATATATTCTACTGGGCCACCGATACCAAGCCAACACCTCCT
CAATTCGATACCGAAATAATGCGTCTGCTAAAGGAGCACGTCAAAAATCA
TGAAAAAGTGCAAAGGATAAGGCAGCCGGATTTGGCAAGCTTTCTAGACC
AT

BO31090.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG12895-RB 471 CG12895-PB 1..468 17..484 2340 100 Plus
CG12895-RA 471 CG12895-PA 1..468 17..484 2340 100 Plus
CG14757-RA 492 CG14757-PA 130..380 131..381 565 81.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG12895-RB 667 CG12895-RB 46..513 17..484 2340 100 Plus
CG12895-RA 593 CG12895-RA 46..513 17..484 2340 100 Plus
CG14757-RA 739 CG14757-RA 246..496 131..381 565 81.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10436752..10437020 484..216 1345 100 Minus
2R 25286936 2R 10437082..10437263 216..35 910 100 Minus
2R 25286936 2R 8172607..8172749 381..239 415 86 Minus
Blast to na_te.dros performed on 2014-11-28 05:12:16 has no hits.

BO31090.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-09 17:10:34 Download gff for BO31090.complete
Subject Subject Range Query Range Percent Splice Strand
CG12895-RA 28..490 22..486 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:59 Download gff for BO31090.complete
Subject Subject Range Query Range Percent Splice Strand
CG12895-RA 51..513 22..486 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:06:06 Download gff for BO31090.complete
Subject Subject Range Query Range Percent Splice Strand
CG12895-RA 51..513 22..486 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:06:06 Download gff for BO31090.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10436749..10437019 217..486 99 <- Minus
2R 10437082..10437263 35..216 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:59 Download gff for BO31090.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6324587..6324768 35..216 100 <- Minus
arm_2R 6324254..6324524 217..486 99 <- Minus

BO31090.pep Sequence

Translation from 16 to 502

> BO31090.pep
MLRQFIVSTVGRRLQLPMMAQSRLASNLDKTEYTTPGEIVDYDDPPHLPV
PEYPVRPDEPLETRKQRLLYQSRKRGMLENDLLLSTFVAKHLKDFNAEQT
AEYDQLINGVSNDWDIFYWATDTKPTPPQFDTEIMRLLKEHVKNHEKVQR
IRQPDLASFLDH

BO31090.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG12895-PB 156 CG12895-PB 1..156 1..156 825 100 Plus
CG12895-PA 156 CG12895-PA 1..156 1..156 825 100 Plus
CG14757-PA 163 CG14757-PA 44..161 39..156 536 82.2 Plus