Clone BO31103 Report

Search the DGRC for BO31103

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG43075-RA
Protein status:BO31103.pep: Imported from assembly
Sequenced Size:556

Clone Sequence Records

BO31103.complete Sequence

556 bp assembled on 2012-03-19

GenBank Submission: KX794910

> BO31103.complete
GAAGTTATCAGTCGACATGACAATCTACGAGCAGATCAGTGATCAGTTTT
GCCGCGTTGTGCACACCAACCTCAAGATACCACTATCCTATTGCGAAACA
CGCTCACACTGGAAATTCTCGAAAAGTATCGATACAATGATATTTTTCTA
TACCCTTAGCTTTGGTATCCTTCGAGTGATACTACATTTTATAGATTTGG
TGAACATTTACTTCAGAGGGATGCGCTTGAGGCGGCCAAGCAATCTCTTG
ATCTTGAGGGGCGAGAATTCGCGGGGCTTTCGAGTTCTCAAGCACCTTTT
AATGCTGAAAGCATGGATATTAGTCATATACGGCATGGTATTCATCAAGC
CGCATTACATCAATCCTTTCGTTGTGCTTTCTATCATCATTTTGACCATC
GATGTGTTTGTATTGGTGTTGGATATCCTGCGAAAGGCCAGGATACCTCT
TGACCGCAGGGTGACCCTTTGGGAAATGATGCTCAACTTGTGCTGTGTTT
TTTACGTACAGTGGATTCTCAAGCAACAGATCCAGTATGCAAGCTTTCTA
GACCAT

BO31103.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG43075-RA 525 CG43075-PA 1..522 17..538 2610 100 Plus
CG33252-RA 525 CG33252-PA 8..516 24..532 1345 84.3 Plus
CG32588-RA 513 CG32588-PA 1..380 17..411 500 75.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:19:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG43075-RA 757 CG43075-RA 78..600 16..538 2615 100 Plus
CG33252-RA 819 CG33252-RA 101..609 24..532 1345 84.3 Plus
CG32588-RA 677 CG32588-RA 77..461 12..411 510 75.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15220428..15220622 538..344 975 100 Minus
X 23542271 X 15220693..15220858 343..178 830 100 Minus
X 23542271 X 15220937..15221099 178..16 815 100 Minus
X 23542271 X 16896690..16896846 342..186 500 87.9 Minus
X 23542271 X 16896425..16896613 532..344 450 82.5 Minus
X 23542271 X 16896935..16897087 176..24 450 86.3 Minus
X 23542271 X 15206397..15206560 175..12 430 84.1 Minus
Blast to na_te.dros performed 2014-11-28 05:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 4576..4639 199..137 110 65.6 Minus

BO31103.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:05:49 Download gff for BO31103.complete
Subject Subject Range Query Range Percent Splice Strand
CG43075-RA 1..522 17..540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:37 Download gff for BO31103.complete
Subject Subject Range Query Range Percent Splice Strand
CG43075-RA 79..600 17..540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:08:33 Download gff for BO31103.complete
Subject Subject Range Query Range Percent Splice Strand
CG43075-RA 79..600 17..540 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:08:33 Download gff for BO31103.complete
Subject Subject Range Query Range Percent Splice Strand
X 15220424..15220622 344..540 98 <- Minus
X 15220693..15220857 179..343 100 <- Minus
X 15220937..15221098 17..178 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:37 Download gff for BO31103.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15114457..15114655 344..540 98 <- Minus
arm_X 15114726..15114890 179..343 100 <- Minus
arm_X 15114970..15115131 17..178 100   Minus

BO31103.pep Sequence

Translation from 16 to 556

> BO31103.pep
MTIYEQISDQFCRVVHTNLKIPLSYCETRSHWKFSKSIDTMIFFYTLSFG
ILRVILHFIDLVNIYFRGMRLRRPSNLLILRGENSRGFRVLKHLLMLKAW
ILVIYGMVFIKPHYINPFVVLSIIILTIDVFVLVLDILRKARIPLDRRVT
LWEMMLNLCCVFYVQWILKQQIQYASFLDH

BO31103.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:53:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG43075-PA 174 CG43075-PA 1..174 1..174 907 100 Plus
CG33252-PA 174 CG33252-PA 1..172 1..172 633 71.5 Plus
CG32588-PA 170 CG32588-PA 1..168 1..172 496 56.1 Plus
CG9030-PB 210 CG9030-PB 7..199 7..179 226 27.5 Plus
CG43076-PA 160 CG43076-PA 1..157 1..174 153 26.7 Plus