Clone BO31105 Report

Search the DGRC for BO31105

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptCG7548-RA
Protein status:BO31105.pep: Imported from assembly
Sequenced Size:625

Clone Sequence Records

BO31105.complete Sequence

625 bp assembled on 2012-03-19

GenBank Submission: KX795564

> BO31105.complete
GAAGTTATCAGTCGACATGGCTTACTTCCAGTTCCTCAGCGTTGCCTCCA
GCTTGCTTCTACTCCTGGCTCCCACCTGGGCAGGTCTGATTGCTCAGCCG
ACCATCACCTATGCTGGCAATGAGCACGCGGTGGCCCACACCCAACAGAA
TGTAGTAAGGAGCTTCGATGGCACCGTCTCCCACTACGCCAAGTCGCTGG
CCACGCCCTACTCGCAGGTCCACAAGCAGGACACGCGGATCAGCAACAAT
GTCTACCAGCCGGCTGTGGCCAAGACCTTCAGTTATGCTACAGCTCCAGC
TCCGGTTTACACGCACCAGGCTCATCAGGAACCAAAAAATCTGTTTACTC
AGGCATCGCCAGTTTACCAGCAGGATGCTCATGTCCAGACTCCATCGGTT
TACCAGCAGGCTGCTCATGTCCAGACTCCATCGGTTTACCATCAGCCCGC
TCAGGTGCAGAGCTACCACCAACCTGGTCATGTGGAGGCACCTTCTGTTT
ACCAACAGAACGCCCACTACAGCCACCAGCCTGCTGTCATCCACTATTCT
CCGGCGGAGACCGTCTCCCACATGAGCTTCGATGGTTTCGGTACCCACTA
CGGATTTGCAAGCTTTCTAGACCAT

BO31105.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7548-RA 594 CG7548-PA 1..591 17..607 2940 99.8 Plus
CG7548-RA 594 CG7548-PA 346..409 398..461 230 90.6 Plus
CG7548-RA 594 CG7548-PA 382..445 362..425 230 90.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG7548-RA 678 CG7548-RA 12..607 12..607 2965 99.8 Plus
CG7548-RA 678 CG7548-RA 362..425 398..461 230 90.6 Plus
CG7548-RA 678 CG7548-RA 398..461 362..425 230 90.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7505611..7506206 607..12 2965 99.8 Minus
3L 28110227 3L 7505793..7505856 461..398 230 90.6 Minus
3L 28110227 3L 7505757..7505820 425..362 230 90.6 Minus
Blast to na_te.dros performed on 2014-11-28 05:19:58 has no hits.

BO31105.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:05:50 Download gff for BO31105.complete
Subject Subject Range Query Range Percent Splice Strand
CG7548-RA 17..607 17..609 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:42 Download gff for BO31105.complete
Subject Subject Range Query Range Percent Splice Strand
CG7548-RA 17..607 17..609 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:08:42 Download gff for BO31105.complete
Subject Subject Range Query Range Percent Splice Strand
CG7548-RA 17..607 17..609 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:08:42 Download gff for BO31105.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7505609..7506201 17..609 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:42 Download gff for BO31105.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7498709..7499301 17..609 99   Minus

BO31105.pep Sequence

Translation from 16 to 625

> BO31105.pep
MAYFQFLSVASSLLLLLAPTWAGLIAQPTITYAGNEHAVAHTQQNVVRSF
DGTVSHYAKSLATPYSQVHKQDTRISNNVYQPAVAKTFSYATAPAPVYTH
QAHQEPKNLFTQASPVYQQDAHVQTPSVYQQAAHVQTPSVYHQPAQVQSY
HQPGHVEAPSVYQQNAHYSHQPAVIHYSPAETVSHMSFDGFGTHYGFASF
LDH

BO31105.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:53:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG7548-PA 197 CG7548-PA 1..197 1..197 1049 100 Plus
CG8543-PA 219 CG8543-PA 8..219 1..197 320 39.7 Plus
CG8541-PA 275 CG8541-PA 8..275 12..197 303 34.8 Plus