Clone BO31109 Report

Search the DGRC for BO31109

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG42814-RA
Protein status:BO31109.pep: Imported from assembly
Sequenced Size:766

Clone Sequence Records

BO31109.complete Sequence

766 bp assembled on 2012-03-19

> BO31109.complete
GAAGTTATCAGTCGACATGTTAAGACTACTGGGCAGTTTGGGTCGCTCCT
GCTGCTCGTCAGCCAAATCGGGCTTCAAGATCCAGCCAAGTTGTATTTCA
AAGATTTGGTTTGGTCCGATGCCCAAGGATTCGAATTGGATTAAGCCAGG
TCGACTTCACTACATCGAAAACGATGTGGAGAAACAGGTGGACATTATCA
AAACCATAGATGGTGTGGTCGTGATTCTGTACAACAAAGCGAGGGAAAAA
CTAATCTTCGTGCGTCAATTTAGGGGAGCAGTTTACCAGGGAATACATTC
GGCTGGATCACCAGACATGTCCAAGGGAGAAGCTGATCTGGAGCAGTTTC
CTCCCGAAGTAGGAGTCACTTTGGAACTTTGCGGTGGCGCCGTGGACAAG
GACAAAAGCCTGGCGGAGATCGCCAAGGAGGAAGTCCTCGAAGAGTGCGG
TTACGAGGTGCCCACCGAATCCCTGCAGCATGTCTACGACTATAGGTCGG
GTATTGGTACCTCAAGTAGTGCCATGTCTCTGTTCTACTGCGAGGTGTGT
GATGCTCAGAAGGTCTCGGCGGGCGGTGGCATTGGAGAAGAGCGAATCCA
GGTGCTAGAAATGTCCTTGGAGGAGTCGAGGCAGCTGGTCCAAACTGGGG
CGACCACCAATGGTGGACCATCCTGTTTGCTGGGTCTGCTTTGGTTCTTT
CAGCACAAGGCACCCAAGGTTTTAGCTGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGAAACGGG

BO31109.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:20:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG42814-RA 714 CG42814-PA 1..711 17..727 3555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG42814-RA 796 CG31063-RA 35..747 15..727 3565 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27228722..27229434 727..15 3565 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:20:48 has no hits.

BO31109.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:05:52 Download gff for BO31109.complete
Subject Subject Range Query Range Percent Splice Strand
CG42814-RA 6..714 22..728 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:51 Download gff for BO31109.complete
Subject Subject Range Query Range Percent Splice Strand
CG42814-RA 42..751 22..733 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:09:04 Download gff for BO31109.complete
Subject Subject Range Query Range Percent Splice Strand
CG42814-RA 42..751 22..733 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:09:04 Download gff for BO31109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27228718..27229427 22..733 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:51 Download gff for BO31109.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23054440..23055149 22..733 99   Minus

BO31109.pep Sequence

Translation from 16 to 766

> BO31109.pep
MLRLLGSLGRSCCSSAKSGFKIQPSCISKIWFGPMPKDSNWIKPGRLHYI
ENDVEKQVDIIKTIDGVVVILYNKAREKLIFVRQFRGAVYQGIHSAGSPD
MSKGEADLEQFPPEVGVTLELCGGAVDKDKSLAEIAKEEVLEECGYEVPT
ESLQHVYDYRSGIGTSSSAMSLFYCEVCDAQKVSAGGGIGEERIQVLEMS
LEESRQLVQTGATTNGGPSCLLGLLWFFQHKAPKVLAASFLDHSFGARNG

BO31109.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:53:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG42814-PA 237 CG31063-PA 1..237 1..237 1236 100 Plus
CG42813-PA 212 CG31063-PA 4..208 27..233 641 54.6 Plus
CG42813-PB 212 CG42813-PB 4..208 27..233 641 54.6 Plus