BO31109.complete Sequence
766 bp assembled on 2012-03-19
> BO31109.complete
GAAGTTATCAGTCGACATGTTAAGACTACTGGGCAGTTTGGGTCGCTCCT
GCTGCTCGTCAGCCAAATCGGGCTTCAAGATCCAGCCAAGTTGTATTTCA
AAGATTTGGTTTGGTCCGATGCCCAAGGATTCGAATTGGATTAAGCCAGG
TCGACTTCACTACATCGAAAACGATGTGGAGAAACAGGTGGACATTATCA
AAACCATAGATGGTGTGGTCGTGATTCTGTACAACAAAGCGAGGGAAAAA
CTAATCTTCGTGCGTCAATTTAGGGGAGCAGTTTACCAGGGAATACATTC
GGCTGGATCACCAGACATGTCCAAGGGAGAAGCTGATCTGGAGCAGTTTC
CTCCCGAAGTAGGAGTCACTTTGGAACTTTGCGGTGGCGCCGTGGACAAG
GACAAAAGCCTGGCGGAGATCGCCAAGGAGGAAGTCCTCGAAGAGTGCGG
TTACGAGGTGCCCACCGAATCCCTGCAGCATGTCTACGACTATAGGTCGG
GTATTGGTACCTCAAGTAGTGCCATGTCTCTGTTCTACTGCGAGGTGTGT
GATGCTCAGAAGGTCTCGGCGGGCGGTGGCATTGGAGAAGAGCGAATCCA
GGTGCTAGAAATGTCCTTGGAGGAGTCGAGGCAGCTGGTCCAAACTGGGG
CGACCACCAATGGTGGACCATCCTGTTTGCTGGGTCTGCTTTGGTTCTTT
CAGCACAAGGCACCCAAGGTTTTAGCTGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGAAACGGG
BO31109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:20:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42814-RA | 714 | CG42814-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42814-RA | 796 | CG31063-RA | 35..747 | 15..727 | 3565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27228722..27229434 | 727..15 | 3565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:20:48 has no hits.
BO31109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:05:52 Download gff for
BO31109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42814-RA | 6..714 | 22..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:51 Download gff for
BO31109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42814-RA | 42..751 | 22..733 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:09:04 Download gff for
BO31109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42814-RA | 42..751 | 22..733 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:09:04 Download gff for
BO31109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27228718..27229427 | 22..733 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:51 Download gff for
BO31109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23054440..23055149 | 22..733 | 99 | | Minus |
BO31109.pep Sequence
Translation from 16 to 766
> BO31109.pep
MLRLLGSLGRSCCSSAKSGFKIQPSCISKIWFGPMPKDSNWIKPGRLHYI
ENDVEKQVDIIKTIDGVVVILYNKAREKLIFVRQFRGAVYQGIHSAGSPD
MSKGEADLEQFPPEVGVTLELCGGAVDKDKSLAEIAKEEVLEECGYEVPT
ESLQHVYDYRSGIGTSSSAMSLFYCEVCDAQKVSAGGGIGEERIQVLEMS
LEESRQLVQTGATTNGGPSCLLGLLWFFQHKAPKVLAASFLDHSFGARNG
BO31109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:53:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42814-PA | 237 | CG31063-PA | 1..237 | 1..237 | 1236 | 100 | Plus |
CG42813-PA | 212 | CG31063-PA | 4..208 | 27..233 | 641 | 54.6 | Plus |
CG42813-PB | 212 | CG42813-PB | 4..208 | 27..233 | 641 | 54.6 | Plus |