BO31119.complete Sequence
922 bp assembled on 2012-03-19
GenBank Submission: KX796354
> BO31119.complete
GAAGTTATCAGTCGACATGTGTTTCTTTGGCCTTGTTTCGCAGTTCCTGT
TCTTCGTTTACGGCACCATGGGACCGGCCTGGCAAACCTATAAGACTCTG
AACAGCGGAGACGAGGAGTTCCTGGCCTGGGCCAAATACTGGATAGTTTA
CGCCTTCCTGGTCACCTTCGAGGTGCTGGCGGACGTCTTCCTCTCCTGGC
TGCCGCTCTACATGCCCACCAAGTTGCTCCTGGTCGTGTGGATCGTGCTG
TCCGCTCCGGCCGCCAATGTCTGGATATTCGACGCCATCCTGCGTCCGGT
GCTGGCAAAGCGGCAGGAGGAGATCGATCACTTCCTGCACCGGGGCAAGG
AGAAGCTCCTGATCGACGCCCTCGCTTCGATGACACAGCTGGTGGCACAG
ACCCAAATCTCTGTACTGCCTTTCGTGTCCAGCTTCTGGTCGAGATCGAG
CACTGCTCCCCTTAGGACTTCCGATCTGTTGCAGGACTCCACTGGAGAAG
GAATTGGAGGCAGAACTTCCGAGGATACTGACTCGGCCAACGTCTCTGTC
CAAAATCTGTCCAGTGGTTCCAGTCCCGTTGGCAGCTTAGAGCACCTCCG
TGACGACTCTGAGGAGCTTCTGGTGGGCGTTTCGAAGGCCACCACGCACC
TGCAGGCGGAGCAGTTCCAGAGCGACGTGTCGTCGGAATCACCCAGGATA
ATTAATCGCCGACCTCAGCGCAAGTTCAAGAATGCCATTGCTATTGCCTC
CGCCACCAAGCTGGAGGACCTCCATGACGATGTGGAGGATCTGCTGGCCA
AGACGGCGATGGAGACCAGCGGCCAGGAAGTGCGTCAGCAGCGTCAACCG
GCCAGCCGTCGCCGTCTTTTAGCACAATCATTTGTGAAACCTCAAACAGG
TTTAGCAAGCTTTCTAGACCAT
BO31119.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:23:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5539-RB | 891 | CG5539-PB | 1..888 | 17..904 | 4440 | 100 | Plus |
CG5539-RA | 891 | CG5539-PA | 1..888 | 17..904 | 4440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5539-RB | 1334 | CG5539-RB | 129..1016 | 17..904 | 4440 | 100 | Plus |
CG5539-RA | 1078 | CG5539-RA | 129..1016 | 17..904 | 4440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23804939..23805826 | 17..904 | 4440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:23:09 has no hits.
BO31119.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:05:56 Download gff for
BO31119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5539-RA | 129..1016 | 17..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:16 Download gff for
BO31119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5539-RA | 129..1016 | 17..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:04 Download gff for
BO31119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5539-RA | 129..1016 | 17..906 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:04 Download gff for
BO31119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23804939..23805826 | 17..906 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:16 Download gff for
BO31119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19692462..19693349 | 17..906 | 99 | | Plus |
BO31119.pep Sequence
Translation from 16 to 922
> BO31119.pep
MCFFGLVSQFLFFVYGTMGPAWQTYKTLNSGDEEFLAWAKYWIVYAFLVT
FEVLADVFLSWLPLYMPTKLLLVVWIVLSAPAANVWIFDAILRPVLAKRQ
EEIDHFLHRGKEKLLIDALASMTQLVAQTQISVLPFVSSFWSRSSTAPLR
TSDLLQDSTGEGIGGRTSEDTDSANVSVQNLSSGSSPVGSLEHLRDDSEE
LLVGVSKATTHLQAEQFQSDVSSESPRIINRRPQRKFKNAIAIASATKLE
DLHDDVEDLLAKTAMETSGQEVRQQRQPASRRRLLAQSFVKPQTGLASFL
DH
BO31119.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5539-PB | 296 | CG5539-PB | 1..296 | 1..296 | 1499 | 100 | Plus |
CG5539-PA | 296 | CG5539-PA | 1..296 | 1..296 | 1499 | 100 | Plus |
CG42678-PG | 288 | CG30193-PG | 5..279 | 6..278 | 233 | 24.3 | Plus |
CG42678-PE | 288 | CG30193-PE | 5..279 | 6..278 | 233 | 24.3 | Plus |
CG42678-PD | 435 | CG30193-PD | 162..426 | 16..278 | 226 | 24.5 | Plus |