Clone BO31120 Report

Search the DGRC for BO31120

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG14317-RA
Protein status:BO31120.pep: Imported from assembly
Sequenced Size:1378

Clone Sequence Records

BO31120.complete Sequence

1378 bp assembled on 2012-03-19

GenBank Submission: KX796164

> BO31120.complete
GAAGTTATCAGTCGACATGTCGCAAATGCACAATACCGCATTCTACAAGG
ACGCTCTGGTTGCCCAGCAAAATAATACCTGTTCACCGATGGAGGAAATT
GAACCGAACTACATCGACAACCTGCACATTATATTTTTCGAGCAGATTTT
CGAAGAGATCGACAATCTGATCGATCAGGTACGCATGGCTAGGGCCTATC
CACAGTTCATGCCACAGATTCTCAAGTTCTGGCAGAGGCGACTGCACCTG
ATCATCGGTCCAAATACACCATTCCTTGGACTCCTGGACATCGATGACTA
TGTCTTCTTTATGGAACACATGGCTGATAGCTTCACGGATCTGCACGTTC
ACGACGGCGTTGGTTCCTTTTCTGAATTCTACGACTATATCACACACCTG
TGCGATATCAATATCACCAAGTTTCCCAAGGTGGACACTTGCATATTGGC
GGGCAATCCCAACACAGTGGTCGATGAGGACATCCGCGACTTGACGGTAA
TGTTGCCCAATCTCAAGCGCCTAATGACCTGCATGAATCTATCTGGCTTA
TATATGCGTGGCTTCAAGAAGTTGGAGGAGCTGGTATTCAACTCCTTGTA
CCATTCGGTGCCATTGGATAGCCGCTGGATTCAGGATATCTGTCTGACAA
TGACCAATTTGAGAGTCCTTGACATTACCGATCAGTTCGACAGTTGTGTG
AGACTCACAGACATCAAATTGCCCAATCTGGAAGTGCTAAAAATCAACTT
GAGCACCGTAGAATGCATGCTATCGGAGGTGCTGCAGTTGCCCAAGTTAC
AGAAACTATCCGTGCGATTCGATGATTCGCGGCAATTGAACGCAGATCAG
GAGACCATCTTCCAGCAGATTGTGGTGGCCAAAAGCGAAAGGATCACCCG
AATTGCCCTGAACAACGAAGTGGTTCAATTGCCAGCTCGGTGGCAGCAAA
GTTTGCTCCTCGAACTGCCCAAGCTGAGGAAGGTGATATGCGAGAATTGG
TGCCACAATGATTTCTTCCTGGATCGCCAGCACATGCCCTGCCAACAAAT
GGAGGTGCTCAGCTTCAGTGGCTGGGAGATTGTGCGGGAGACTCAGCTCC
TGGAACTGGTCGCCGAGTGCGTCAATCTGGAGCACTTGGCTCTGAACGGC
TACCACAGCAACTGGGAGAAACTTACTAAGCTCGTGAATATTCGCAATCA
GGAAAGGAATCCCAGACCACTGCAGGTGTTCAGCGACATGATGTGGGGCA
ACTTCACACCCGAGGAATATTATCACTGGCAGAGCAACAAATATGTTCAG
GTCACCTGTGACAGCAGCGAATACGAATATCAGGAGGATGGTTTCGAGTT
TGATTTTGAGGCAAGCTTTCTAGACCAT

BO31120.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14317-RA 1347 CG14317-PA 1..1344 17..1360 6720 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14317-RA 1536 CG14317-RA 74..1417 17..1360 6720 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18081121..18082464 17..1360 6720 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:24:23 has no hits.

BO31120.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:05:56 Download gff for BO31120.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1344 17..1362 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:20 Download gff for BO31120.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1344 17..1362 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:32 Download gff for BO31120.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 74..1417 17..1362 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:32 Download gff for BO31120.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18081121..18082464 17..1362 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:20 Download gff for BO31120.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13906843..13908186 17..1362 99   Plus

BO31120.pep Sequence

Translation from 16 to 1378

> BO31120.pep
MSQMHNTAFYKDALVAQQNNTCSPMEEIEPNYIDNLHIIFFEQIFEEIDN
LIDQVRMARAYPQFMPQILKFWQRRLHLIIGPNTPFLGLLDIDDYVFFME
HMADSFTDLHVHDGVGSFSEFYDYITHLCDINITKFPKVDTCILAGNPNT
VVDEDIRDLTVMLPNLKRLMTCMNLSGLYMRGFKKLEELVFNSLYHSVPL
DSRWIQDICLTMTNLRVLDITDQFDSCVRLTDIKLPNLEVLKINLSTVEC
MLSEVLQLPKLQKLSVRFDDSRQLNADQETIFQQIVVAKSERITRIALNN
EVVQLPARWQQSLLLELPKLRKVICENWCHNDFFLDRQHMPCQQMEVLSF
SGWEIVRETQLLELVAECVNLEHLALNGYHSNWEKLTKLVNIRNQERNPR
PLQVFSDMMWGNFTPEEYYHWQSNKYVQVTCDSSEYEYQEDGFEFDFEAS
FLDH

BO31120.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14317-PA 448 CG14317-PA 1..448 1..448 2388 100 Plus
CG7148-PA 454 CG7148-PA 19..362 43..374 247 25.2 Plus