BO31127.complete Sequence
1552 bp assembled on 2012-03-19
GenBank Submission: KX798255
> BO31127.complete
GAAGTTATCAGTCGACATGCGCGATGTGCCGAAATCTCTCGGTCTCTCGG
TCACAACTCCAGGCGGCAGTTCGGGTGCTCCGGACAGTGGTCGCCACAAC
AGCTTGGAGGAGATCAATCTGGACCAGTTCCTGAAAACGTCCAACTACGA
GGACACGGTGAAGCAGCTGGACATCTACTATGGCATTGTCAAGCGTCAAC
TGCTGCGATACCAGAGTCCCATCACCGGTTTGTTTCCGGTGATGAGCACC
GACCAGGTGGTGGGATCGGTGCGGGACAGTGTGTATTGCGCATCCGCCGT
GTGGAGCTTGTACCAGGCGTACAGACGGATCGACGATGACCGCGGAAAGT
CCTACGAACTGGGCCAGAGCACTGTGAAGTGCATGCGAGGCATTCTTGAG
TGCTGGGTCAAGCAGGCATCGCGGGTGGAGCTCTTTAAGCAGCGCCAGTC
CAATCAGCACGCACTGCATAGCAAATTCCAGCTGCACACCGGAGAGAAGA
TATATCCGGATGAGTTTTACAATCACCTACAGATAGATTGCGTTTCTCTC
TATCTGTTGTTCCTCGTCCAGATGATAACCTCTGGCCTGCAGATCATTTA
CACCCACGACGAGGTGGCCTTTGTCCAGAATCTAGTGTACTATGTGGAGC
GCGCCTATCGTACGCCCGACTTTGGCATGTGGGAGCGGGGCTCTAAATAT
AACAATGGCACCCCGGAGATCCATGCCTCCTCCATTGGCATGGCTAAGTC
CGCCTTGGAGGCCATTAACGGGTGCAATCTGTTCGGCGAGAAAGGAGCTT
CATGGAGCGTTGTCTATGTGGACATTGATGCCCACAACCGGAATCGCAGT
ATTTTCGAAACCATGCTGCCCAGGGAATCAAGCTCAAAGGGAGTTGATGC
TTCACTGCTTCTCACCCTTTCTTTCCCAGCCTTTGCCTCGCATGAAGATC
GCCTGGTGGAGCAGACCAAACAAAATGTTGTAAATCGTTTGCGCTGCAAA
ATGGGCTTTAAGCGCTTCACCCGTGATGGATTCCTCAGCAAAAACGAGGA
CAAATCGCGACGCTATTATCACTCTGGCGAGCTAAAGGAATTCGAAGGCC
TGGAATGTGAATGGCCGCTCTTTTTCATAGCCATGATTATCGATGGCGTG
TTCAAGAATAACAATGAACAAATTGAAGAGTTCCAAAACGATTTGAGGCG
CTGTTTGCGTACTGATGTCAATGGAGATCCCGTAGTGACCATGTACTATG
CGCCGGATGGAGATGGCTCCTACATGCGTGCTCCATCGCAATCGCTGTTC
CTCTGGGGGCAGTCCTTCTTTATCATAGCCCAGCTGCTGACCGCAGGACT
CCTACACATCAATGAACTGGATCCAATCCGCCGCTACTTGCCAAGCTATA
ATCGGCCTAGAAGGGCGGGTCGTTATTCGGCTTTCCAGGTGAGTTGGAAT
CGGGATTCTTGGAGGGCACTAAGCGCTATGAAGTGTTTTCTTAAATTGTT
AACCAATGGCAAAGCATTCTGGATCACAATAGGTGCAAGCTTTCTAGACC
AT
BO31127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:26:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8475-RB | 1521 | CG8475-PB | 1..1518 | 17..1534 | 7590 | 100 | Plus |
| CG8475-RC | 3297 | CG8475-PC | 1..1423 | 17..1439 | 7115 | 100 | Plus |
| CG8475-RA | 3282 | CG8475-PA | 1..1423 | 17..1439 | 7115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8475-RB | 5361 | CG8475-RB | 104..1621 | 17..1534 | 7590 | 100 | Plus |
| CG8475-RC | 3731 | CG8475-RC | 104..1526 | 17..1439 | 7115 | 100 | Plus |
| CG8475-RA | 3570 | CG8475-RA | 104..1526 | 17..1439 | 7115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8194925..8195571 | 1534..888 | 3235 | 100 | Minus |
| 2L | 23513712 | 2L | 8196035..8196390 | 543..188 | 1780 | 100 | Minus |
| 2L | 23513712 | 2L | 8195628..8195976 | 890..542 | 1745 | 100 | Minus |
| 2L | 23513712 | 2L | 8196584..8196735 | 188..37 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:26:28 has no hits.
BO31127.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:00 Download gff for
BO31127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8475-RB | 79..1596 | 17..1536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:39 Download gff for
BO31127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8475-RB | 104..1621 | 17..1536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:11:19 Download gff for
BO31127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8475-RB | 104..1621 | 17..1536 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:11:19 Download gff for
BO31127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8196584..8196735 | 37..188 | 100 | <- | Minus |
| 2L | 8196796..8196815 | 17..36 | 100 | | Minus |
| 2L | 8195629..8195976 | 542..889 | 100 | <- | Minus |
| 2L | 8196037..8196389 | 189..541 | 100 | <- | Minus |
| 2L | 8194923..8195569 | 890..1536 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:39 Download gff for
BO31127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8194923..8195569 | 890..1536 | 99 | <- | Minus |
| arm_2L | 8195629..8195976 | 542..889 | 100 | <- | Minus |
| arm_2L | 8196037..8196389 | 189..541 | 100 | <- | Minus |
| arm_2L | 8196584..8196735 | 37..188 | 100 | <- | Minus |
| arm_2L | 8196796..8196815 | 17..36 | 100 | | Minus |
BO31127.pep Sequence
Translation from 16 to 1552
> BO31127.pep
MRDVPKSLGLSVTTPGGSSGAPDSGRHNSLEEINLDQFLKTSNYEDTVKQ
LDIYYGIVKRQLLRYQSPITGLFPVMSTDQVVGSVRDSVYCASAVWSLYQ
AYRRIDDDRGKSYELGQSTVKCMRGILECWVKQASRVELFKQRQSNQHAL
HSKFQLHTGEKIYPDEFYNHLQIDCVSLYLLFLVQMITSGLQIIYTHDEV
AFVQNLVYYVERAYRTPDFGMWERGSKYNNGTPEIHASSIGMAKSALEAI
NGCNLFGEKGASWSVVYVDIDAHNRNRSIFETMLPRESSSKGVDASLLLT
LSFPAFASHEDRLVEQTKQNVVNRLRCKMGFKRFTRDGFLSKNEDKSRRY
YHSGELKEFEGLECEWPLFFIAMIIDGVFKNNNEQIEEFQNDLRRCLRTD
VNGDPVVTMYYAPDGDGSYMRAPSQSLFLWGQSFFIIAQLLTAGLLHINE
LDPIRRYLPSYNRPRRAGRYSAFQVSWNRDSWRALSAMKCFLKLLTNGKA
FWITIGASFLDH
BO31127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8475-PB | 506 | CG8475-PB | 1..506 | 1..506 | 2671 | 100 | Plus |
| CG8475-PC | 1098 | CG8475-PC | 1..474 | 1..474 | 2495 | 100 | Plus |
| CG8475-PA | 1093 | CG8475-PA | 1..474 | 1..474 | 2495 | 100 | Plus |
| CG7766-PI | 1210 | CG7766-PI | 10..436 | 50..464 | 955 | 45.6 | Plus |
| CG7766-PD | 1227 | CG7766-PD | 10..436 | 50..464 | 955 | 45.6 | Plus |
