Clone BO31129 Report

Search the DGRC for BO31129

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG42729-RA
Protein status:BO31129.pep: Imported from assembly
Sequenced Size:589

Clone Sequence Records

BO31129.complete Sequence

589 bp assembled on 2012-03-19

GenBank Submission: KX799618

> BO31129.complete
GAAGTTATCAGTCGACATGTGGCAATTGTTGATAGTCTTGGCCTGCCTGT
TACCTGGCTACCTCTGGGTGCAGGTGCAGGCGGTTTTTCTCGAGGAATGC
AAAGGTGTGATCATCAATAAGGTGACCAATGAGAATCAGGAGTGCAGTGA
GTTTGTTCACTGCGATGGCGATGATTCCTACTACTGCAATGGGGATTGTC
GTGAGGCCGTGGAGTGTTATACCAATGTGGTTACCACACCGGTTACCACA
TTAAGACCCATAGGAACCTCTACGGAACGAGCACCATCCGCAGAGCCAGT
CAATACTACATCTACGACTTTAGCTACTACCACGCCAACAACGATTGCTG
TAACCACGACTACAAGCCAAGTTCCGAGCACCGATGTCTATGTCATCTGC
AAGACGAGTGGAAGGAACGGGGTCTATCCCTATCCGGCAAATAGCAATTA
CTATTATCAGTGTATTTCCGGTTATCTGTTGCTCCAGCAGTGCCCACAGA
ATTTCCATTTCGATGTCGCCCAGGGACAGTGCGTTGCCACAAAACCCAAT
CGTTCATCGGGCTTACGTTTGGCAAGCTTTCTAGACCAT

BO31129.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:27:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG42729-RA 558 CG42729-PA 1..555 17..571 2775 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG42729-RA 607 CG42729-RA 9..563 17..571 2775 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15526954..15527508 571..17 2775 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:27:08 has no hits.

BO31129.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:01 Download gff for BO31129.complete
Subject Subject Range Query Range Percent Splice Strand
CG42729-RA 1..555 17..573 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:49 Download gff for BO31129.complete
Subject Subject Range Query Range Percent Splice Strand
CG42729-RA 9..563 17..573 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:11:34 Download gff for BO31129.complete
Subject Subject Range Query Range Percent Splice Strand
CG42729-RA 9..563 17..573 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:11:34 Download gff for BO31129.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15526952..15527508 17..573 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:49 Download gff for BO31129.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15520052..15520608 17..573 99   Minus

BO31129.pep Sequence

Translation from 16 to 589

> BO31129.pep
MWQLLIVLACLLPGYLWVQVQAVFLEECKGVIINKVTNENQECSEFVHCD
GDDSYYCNGDCREAVECYTNVVTTPVTTLRPIGTSTERAPSAEPVNTTST
TLATTTPTTIAVTTTTSQVPSTDVYVICKTSGRNGVYPYPANSNYYYQCI
SGYLLLQQCPQNFHFDVAQGQCVATKPNRSSGLRLASFLDH

BO31129.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG42729-PA 185 CG42729-PA 1..185 1..185 1000 100 Plus
CG42728-PA 156 CG42728-PA 10..152 4..172 163 28.2 Plus
CG33263-PA 227 CG33263-PA 12..214 11..172 159 23.7 Plus