BO31130.complete Sequence
625 bp assembled on 2012-03-19
GenBank Submission: KX799597
> BO31130.complete
GAAGTTATCAGTCGACATGCGTTGTATGCTTATAGTATTTGCCATAGCTG
CTGTAAGCCTTTCGTGTGCTGCTCCTGCGAAATCGCAAAACGAGATGTTA
GCTCATTTCTTTGACTATGCTGACACCCTCCGTGGCATTCAAATCCATAA
TATGATGTCACTCACCATCAAATTCGTGCAACAAGTTGTGGACACAGTTC
CGCTTGAACAACGTGGACCGGGAACGGCTGCCCTCCAGGCCTATGCCAAC
AAGGGCAAGAGTCTCAAACAGCGAGGCACAACTGGCGAGAAATATAACTA
TATCTACGAACTGCAACAGGTATTCGAGGGACTCAACAGCGAGCTGAGTC
AATCGGCACCTGAATCCCAGGTGATTGGAATGAGCCTGCTGGGTTTACTG
GGCGTTAGCACTGAATTCGCCAATGAGAATGAGAAACTCCACAATAAGTT
TGTCGAAGGTGCCACCCAAATGAAAGCCATGTTGTCTCCGACCACAATAG
CTCGGGAAAGTGAGCTCCTCGAGGCGATCGACAAATACATCGCTTCCACT
GATATACAGCAGCACGAAGCTCTCTTTATGAAAGTCATGAGCTTCAAGGA
TAGGTACGCAAGCTTTCTAGACCAT
BO31130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13962-RB | 459 | CG13962-PB | 1..456 | 152..607 | 2280 | 100 | Plus |
| CG13962-RA | 459 | CG13962-PA | 1..456 | 152..607 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13962-RB | 769 | CG13962-RB | 21..611 | 17..607 | 2955 | 100 | Plus |
| CG13962-RA | 651 | CG13962-RA | 21..611 | 17..607 | 2955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19813862..19814413 | 607..56 | 2760 | 100 | Minus |
| 2L | 23513712 | 2L | 19814474..19814512 | 55..17 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:27:23 has no hits.
BO31130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:02 Download gff for
BO31130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13962-RA | 25..615 | 17..609 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:53 Download gff for
BO31130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13962-RA | 21..611 | 17..609 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:11:38 Download gff for
BO31130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13962-RA | 21..611 | 17..609 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:11:38 Download gff for
BO31130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19813860..19814413 | 56..609 | 99 | <- | Minus |
| 2L | 19814474..19814512 | 17..55 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:53 Download gff for
BO31130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19813860..19814413 | 56..609 | 99 | <- | Minus |
| arm_2L | 19814474..19814512 | 17..55 | 100 | | Minus |
BO31130.pep Sequence
Translation from 16 to 625
> BO31130.pep
MRCMLIVFAIAAVSLSCAAPAKSQNEMLAHFFDYADTLRGIQIHNMMSLT
IKFVQQVVDTVPLEQRGPGTAALQAYANKGKSLKQRGTTGEKYNYIYELQ
QVFEGLNSELSQSAPESQVIGMSLLGLLGVSTEFANENEKLHNKFVEGAT
QMKAMLSPTTIARESELLEAIDKYIASTDIQQHEALFMKVMSFKDRYASF
LDH
BO31130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13962-PB | 152 | CG13962-PB | 1..152 | 46..197 | 756 | 100 | Plus |
| CG13962-PA | 152 | CG13962-PA | 1..152 | 46..197 | 756 | 100 | Plus |
