Clone BO31131 Report

Search the DGRC for BO31131

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptChro-RA
Protein status:BO31131.pep: Imported from assembly
Sequenced Size:2812

Clone Sequence Records

BO31131.complete Sequence

2812 bp assembled on 2012-04-06

GenBank Submission: KX799301

> BO31131.complete
GAAGTTATCAGTCGACATGTTGGCACAGGAGATTTCACCTACGGAAATCG
GCAAACACGCAAACATTATAAGAGCTGCACAGGAGGAATTGGCAAACATG
GACGTTCTTGTATGTGGACGATGTCTCCGGGCCTACAACTTCGTGGAAGA
GTTTCAGGCCCACAAAGAGGACGCCTGCGAAAAGGAAAATGCAAATTTGA
AGGAATCGCTCGATCCCAAGCCCACCATCTGGGCTTTTACGCTATGGAAA
GCTACTCAGCTGCACTCGCGCAAGGACGCGTCCGGCAGCTCGTGGGCCTT
GTACCAGCATTGGGTAAAACTAGACGATAGCGTCCGCGAGCCGTGGATTG
TGGCTGGGAAGACCATACAGTCATTCGGCAAAATTGCACACGGACAACTC
CAGGACATGCCTGTGCGAATAACAAAGACTGTGGTCAATCCAAACAATAA
CAACACATCAAATAGCAACAACAACAACACGAGCGTCTCCCCTACCAGAA
AATCACCAACCGGTAAGCTGCCTACGTTAGCCAATCAACTAAAGGATACA
GAAAACGAAAGACCCAAGTCCAAGCCGAGTACACCAACGCCTTCCTCAGT
TCCCTCTGCCGGAGCCGTGAAGCCGAACAACCGCATAGCCATTAGGATCG
ATTCCAAGACAGATCAGCGCACCGAAGAGCCAGTGGAAAAGATTGTCGCT
AAGCGCTTCAATCCGCGCCGTAAGACCCACGAGTATTTGGTTAAGTGGGT
TGATCGCTCGCATCATGAAAACACCTGGGAGGTGATGGCCAATCTCGAGC
GTGTGCCATACTTTTTGCAGATGTTCGAAAAGCAATTGGCACGCCAAAAA
CTTACTAGGGAGAAGGGTCTGGATGCTCTGAAGCGCATGCAGTCATCAGG
GACAAACGCAAAGTCAGATACTGCCGCCCCACACAGCCCACTTCCGGCGT
CGTCGCAGGTATCGCCGTCTTCTCGGCCATCTCGAACTTCCAAGACCAAG
GCTATGGATGCCTTTAAGCAGTGGGTCAATGAAACCGTTGCCGGAGATGG
ATCCTCCTCGCCTTCCTCGGCAAACGAAGATGAATCCTCCACGGAACAGG
AATGGCCACCATCTTCTGGAGCGATCAAGCGAAAGCTGAACAATACAGAC
TCAAGTTTAGAGGGGAGCGGGTTAAACGACTCGATGGACCTAGAGGACCT
TGAAGAGGATCTTCCGTCCCATACCGTGAAGCGTCTAAAAAACGGAGGAA
GCTCCGTGCAGTTGAACAAGCCACGGATTCAGTCCACGGAAAAGCAGCAG
ACTAAAATTAACGGCAATTCCACCGTGGTATCGCCCCTAACGGAACAAAA
AATGGGTGAAATCATCTATACTGAGGATAGCACGAGCTCCGGCATGTTTC
GCAAGCCCGAGATGCCAAACACAATAAATTTGAAAAAGGAGAAACCAGAG
TGTCCCGTGCGGTATCTTTCGCGCTCCGAGGTGGGCAGCAGCACAAGAGG
CGTTTTTCGGGTTGAAAATTCCGAGGCACCGGCACCCGTTTCGCCTGCAC
CCGTTCCGCAAAAAGTGATCGCTGCGCCGCCCGCCGCAGGCATAGCCAAG
CGTTTGCCAATGGCTCGTCCTGCGCATTCGGGCGCTAACTCGCCCATCAC
TGTGGGCCAGCGACAACACGCGCTTCGAACTCCCGGCCACGGCCCTGTAA
CAGCAGCACTTCATCGCCGTCCTGGAGTGGGTGGTGCATCCCATGTGCGT
CAAAACTTGCAGCAGGCGCCCGGCCGGGCTCACCCGGGTGGTCGAGTCCT
TGCACGAGCCGGTGTCGGAACTCCGCAACATCGCCAACAAGTACAAACTC
CTCAGGGTGCCAAGGCAGTTACGCCAGAGCAAAAGATTTTACAGCTGTCA
AAGTCAGGGGACTTGAAAGTTACGCGTAAAGTAGTGACCCGGGAAGAGTT
GTTGGCTCAGCGCTCTGCCCAGGCACGCCAGCGACAGGCTCTGTCTCAGC
AGCAGTCCAGTCAACAACAGAAAGCGACTCCTGCCCGGCAAAGAATAGTT
TCCAAGTCAACAATCCAGCCAACGCCCCTGCAAATGGAATTGGAGGAGGA
GATTCATCAGCACCAAGCTCAGTTGTGTCCAATCACCGGCAAGCTTATTG
GTCAGGAGGAGACCCAACTGCAAATGGAGCAGGAGCAACAGCAGGAGCAA
CAACGAGAGCAGCTAGAAGCCGCGGCACAGGCCCTTCTGGGCAGCGATCA
ACAAGTTCTTACCAACGAGGACGGCTCGGCCTTGCTGGTGCGAGGAGAGG
ACGGCACTGTTTACCAGGTAGCGGGAAAAAATGCGGAGGGACAAACTATT
CTCGTTACGCAGGGCCCGGATGGAGAACAGCAATTTGCGTACGTGGCAGC
CGCAGAGGGAGAAGACCAGGATGTTCTTTCTCTGGACCACGCAGTGGCCG
AAGCCGTTCAAGCCGGTGAACAGGTCGAGTCTCACGGCGTCGGAGCAGCT
ACGGCGGACGGTGAACAGATTCTCGTGTCCATGACAGAAGAGGAGTTGGC
GCAACACCAGGTGCTTCAACAAGCGGAGGCTTCTGCCGCTGGAACGGGAA
CGCCACCCACAGCTCAGATCCATATCACGACGTCAGACAGCGATGGCACG
GAATCCCAGATACCAGCGGAGGTGGTACAGGCAGATTTGCCTTCACCGGG
AGGTACACGTCGCGTTGTTTTGTTGCTTCAGGATGGAACCTTCATGATGA
CTGAGATGCACGAAGATCAGTTTAAGACGCTCAACATCCCAACGGCAAGC
TTTCTAGACCAT

BO31131.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
Chro-RE 2781 CG10712-PE 1..2778 17..2794 13890 100 Plus
Chro-RD 2781 CG10712-PD 1..2778 17..2794 13890 100 Plus
Chro-RA 2781 CG10712-PA 1..2778 17..2794 13890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:20:26
Subject Length Description Subject Range Query Range Score Percent Strand
Chro-RE 4056 CG10712-RE 376..3153 17..2794 13890 100 Plus
Chro-RD 3915 CG10712-RD 235..3012 17..2794 13890 100 Plus
Chro-RA 3871 CG10712-RA 191..2968 17..2794 13890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:20:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22875123..22876391 2700..1432 6345 100 Minus
3L 28110227 3L 22876457..22877388 1432..501 4660 100 Minus
3L 28110227 3L 22877450..22877877 500..73 2140 100 Minus
3L 28110227 3L 22874605..22874700 2794..2699 480 100 Minus
3L 28110227 3L 22877937..22877994 74..17 290 100 Minus
Blast to na_te.dros performed 2014-11-28 04:20:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..6849 2153..2227 155 70.5 Plus
roo 9092 roo DM_ROO 9092bp 1067..1140 2153..2227 147 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2343..2396 2165..2218 135 72.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2761..2876 2154..2274 134 64 Plus
roo 9092 roo DM_ROO 9092bp 1100..1165 2153..2215 134 69.7 Plus

BO31131.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:46:41 Download gff for BO31131.complete
Subject Subject Range Query Range Percent Splice Strand
Chro-RA 153..2925 22..2796 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:11 Download gff for BO31131.complete
Subject Subject Range Query Range Percent Splice Strand
Chro-RC 96..2868 22..2796 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:02 Download gff for BO31131.complete
Subject Subject Range Query Range Percent Splice Strand
Chro-RA 196..2968 22..2796 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:02 Download gff for BO31131.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22874603..22874699 2700..2796 97 <- Minus
3L 22875124..22876390 1433..2699 100 <- Minus
3L 22876457..22877388 501..1432 100 <- Minus
3L 22877450..22877875 75..500 100 <- Minus
3L 22877937..22877989 22..74 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:11 Download gff for BO31131.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22867703..22867799 2700..2796 97 <- Minus
arm_3L 22868224..22869490 1433..2699 100 <- Minus
arm_3L 22869557..22870488 501..1432 100 <- Minus
arm_3L 22870550..22870975 75..500 100 <- Minus
arm_3L 22871037..22871089 22..74 100   Minus

BO31131.pep Sequence

Translation from 16 to 2812

> BO31131.pep
MLAQEISPTEIGKHANIIRAAQEELANMDVLVCGRCLRAYNFVEEFQAHK
EDACEKENANLKESLDPKPTIWAFTLWKATQLHSRKDASGSSWALYQHWV
KLDDSVREPWIVAGKTIQSFGKIAHGQLQDMPVRITKTVVNPNNNNTSNS
NNNNTSVSPTRKSPTGKLPTLANQLKDTENERPKSKPSTPTPSSVPSAGA
VKPNNRIAIRIDSKTDQRTEEPVEKIVAKRFNPRRKTHEYLVKWVDRSHH
ENTWEVMANLERVPYFLQMFEKQLARQKLTREKGLDALKRMQSSGTNAKS
DTAAPHSPLPASSQVSPSSRPSRTSKTKAMDAFKQWVNETVAGDGSSSPS
SANEDESSTEQEWPPSSGAIKRKLNNTDSSLEGSGLNDSMDLEDLEEDLP
SHTVKRLKNGGSSVQLNKPRIQSTEKQQTKINGNSTVVSPLTEQKMGEII
YTEDSTSSGMFRKPEMPNTINLKKEKPECPVRYLSRSEVGSSTRGVFRVE
NSEAPAPVSPAPVPQKVIAAPPAAGIAKRLPMARPAHSGANSPITVGQRQ
HALRTPGHGPVTAALHRRPGVGGASHVRQNLQQAPGRAHPGGRVLARAGV
GTPQHRQQVQTPQGAKAVTPEQKILQLSKSGDLKVTRKVVTREELLAQRS
AQARQRQALSQQQSSQQQKATPARQRIVSKSTIQPTPLQMELEEEIHQHQ
AQLCPITGKLIGQEETQLQMEQEQQQEQQREQLEAAAQALLGSDQQVLTN
EDGSALLVRGEDGTVYQVAGKNAEGQTILVTQGPDGEQQFAYVAAAEGED
QDVLSLDHAVAEAVQAGEQVESHGVGAATADGEQILVSMTEEELAQHQVL
QQAEASAAGTGTPPTAQIHITTSDSDGTESQIPAEVVQADLPSPGGTRRV
VLLLQDGTFMMTEMHEDQFKTLNIPTASFLDH

BO31131.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:42
Subject Length Description Subject Range Query Range Score Percent Strand
Chro-PE 926 CG10712-PE 1..926 1..926 4736 100 Plus
Chro-PD 926 CG10712-PD 1..926 1..926 4736 100 Plus
Chro-PA 926 CG10712-PA 1..926 1..926 4736 100 Plus
Chro-PC 926 CG10712-PC 1..926 1..926 4736 100 Plus
Chro-PB 926 CG10712-PB 1..926 1..926 4736 100 Plus