BO31136.complete Sequence
505 bp assembled on 2012-03-19
GenBank Submission: KX795859
> BO31136.complete
GAAGTTATCAGTCGACATGAGACCCGAATTCGTCCTGGCCTTTGGTTTGG
TTGTCCTCGTGGCGACCGTTTATGGTGGCACCGACTCATCCTCGAGCGAC
TCGTCCTCTTCCACATCACCCACTTCCAATTCATCGACTCCATCGACTTC
CAGCTCAAGTTCGACACCCAGCTCTTCGTCCTCCACCTCAACTCCGTCCA
GCAATAGCACTACGTCTACTTCGTCCTCCACTCCTAGCAGCTCTTCTTCC
ACTTCGCCCACTTCCTCCACCTCATCGACGACTGCCACAACCACGGCCCC
CTCCACGTCCAGCGACACGTCCTCCTCCTCCACGAGCTCCGACAGCGAGG
AGGTGGACAGGCTGAGGCGCAGGCTTCGCAGGCTCCGGCGGCTGAGGCGT
CAGGAGAGGCGCCAGGAGATTCGCCGGGAGAGGCAGCAGGAAAGGCGCCA
GCAGAGTCGTGCTGGAAGAAGGCGCCAACGTAGGGGAGCAAGCTTTCTAG
ACCAT
BO31136.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:25:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34105-RA | 474 | CG34105-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
| CG12491-RA | 474 | CG12491-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34105-RA | 574 | CG34105-RA | 40..510 | 17..487 | 2355 | 100 | Plus |
| CG12491-RA | 580 | CG12491-RA | 40..510 | 17..487 | 2355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23749382..23749852 | 487..17 | 2355 | 100 | Minus |
| 2R | 25286936 | 2R | 23750685..23751155 | 17..487 | 2355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:25:18 has no hits.
BO31136.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:05:58 Download gff for
BO31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34105-RA | 1..471 | 17..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:32 Download gff for
BO31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34105-RA | 40..510 | 17..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:53 Download gff for
BO31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12491-RA | 40..510 | 17..489 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:53 Download gff for
BO31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23750685..23751155 | 17..489 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:32 Download gff for
BO31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19638208..19638678 | 17..489 | 99 | | Plus |
BO31136.pep Sequence
Translation from 16 to 505
> BO31136.pep
MRPEFVLAFGLVVLVATVYGGTDSSSSDSSSSTSPTSNSSTPSTSSSSST
PSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSSD
TSSSSTSSDSEEVDRLRRRLRRLRRLRRQERRQEIRRERQQERRQQSRAG
RRRQRRGASFLDH
BO31136.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34105-PA | 157 | CG34105-PA | 1..157 | 1..157 | 746 | 100 | Plus |
| CG12491-PA | 157 | CG12491-PA | 1..157 | 1..157 | 746 | 100 | Plus |
| CG13560-PB | 181 | CG13560-PB | 1..181 | 1..150 | 275 | 40.3 | Plus |
| CG13560-PA | 181 | CG13560-PA | 1..181 | 1..150 | 275 | 40.3 | Plus |
| CG11300-PA | 157 | CG11300-PA | 1..152 | 1..155 | 242 | 38.1 | Plus |
