BO31141.complete Sequence
524 bp assembled on 2012-03-19
> BO31141.complete
GAAGTTATCAGTCGACATGCCCAACGTGATCGTCAACCTGTCATTAATTT
TCTTATTCTTGGGTGGTATTTTCCATCTCAATGAAGCCCAGACAACGGAT
TGTTCGAATTCGTGTATTTTTCGAGCAAGATGCACTCCCTACTACAAGGA
TTTGGTCTGGTCAGTGGTGGACCGCGTTTGTCGGGTCTTTCAAAACGGTT
GCATCTTTGCCAATGAAAATTGCATGAGAGCCAATCGCTGCTTGCCACCC
ATGGTAGCCACCACAAAGGAAGAGTGTACGAAGGAGATCTACTGTCCAAG
GTGGTGTTCCCGAGGAGCTCCGCCGGTCTGCGCATGGTTTCCCTATACAG
ACAGTAATGGGAATACCGGAGGTCGAGACATGTCATTCGGAAGTCGCTGT
CTACTAGACATGTATGCCTGCCGTAATGAACAGGCCTATGTCAACGAACC
ACGTATAGGATCGTGCACAGCTAAGCTTTCTAGACCTATTCGTGTTGGCG
GCGGCGGGGCGCGCGCGAGGGGGT
BO31141.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:29:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42823-RA | 456 | CG42823-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42823-RA | 508 | CG34053-RB | 4..457 | 16..469 | 2270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17404874..17405106 | 248..16 | 1165 | 100 | Minus |
3R | 32079331 | 3R | 17404630..17404815 | 434..249 | 930 | 100 | Minus |
3R | 32079331 | 3R | 17404538..17404573 | 469..434 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:29:53 has no hits.
BO31141.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:06 Download gff for
BO31141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42823-RA | 5..460 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:16 Download gff for
BO31141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42823-RA | 5..460 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:12:28 Download gff for
BO31141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42823-RA | 5..460 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:12:28 Download gff for
BO31141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17404538..17404572 | 435..469 | 100 | <- | Minus |
3R | 17404630..17404815 | 249..434 | 100 | <- | Minus |
3R | 17404874..17405105 | 17..248 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:16 Download gff for
BO31141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13230260..13230294 | 435..469 | 100 | <- | Minus |
arm_3R | 13230352..13230537 | 249..434 | 100 | <- | Minus |
arm_3R | 13230596..13230827 | 17..248 | 100 | | Minus |
BO31141.pep Sequence
Translation from 16 to 523
> BO31141.pep
MPNVIVNLSLIFLFLGGIFHLNEAQTTDCSNSCIFRARCTPYYKDLVWSV
VDRVCRVFQNGCIFANENCMRANRCLPPMVATTKEECTKEIYCPRWCSRG
APPVCAWFPYTDSNGNTGGRDMSFGSRCLLDMYACRNEQAYVNEPRIGSC
TAKLSRPIRVGGGGARARG
BO31141.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:54:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42823-PA | 151 | CG42823-PA | 1..151 | 1..151 | 853 | 100 | Plus |
CG7695-PA | 145 | CG7695-PA | 7..131 | 6..141 | 146 | 28.7 | Plus |
CG7587-PA | 142 | CG7587-PA | 32..138 | 38..143 | 145 | 33.6 | Plus |