Clone BO31148 Report

Search the DGRC for BO31148

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptTsp97E-RC
Protein status:BO31148.pep: Imported from assembly
Sequenced Size:637

Clone Sequence Records

BO31148.complete Sequence

637 bp assembled on 2012-03-19

GenBank Submission: KX797307

> BO31148.complete
GAAGTTATCAGTCGACATGATTGGATTCCTGCTGATTGGAGTGGGCGTGT
ACGCGCGTGCCGCCTCCATAGTGACCAACCTGCCGATTGTGGGCGGGATC
CTGGCCTGCGGTGTCATCCTCATATGCATATCCATGCTGGGACTCGCCGG
AGCCGTCAAGCACCACCAAGTGATGCTCTTCTTCTACATGATCATTCTGT
TCATGCTGTTCCTGATCCAGTTCTCCATCGCCAGTTCCTGCTTGGCCGTC
AACTCCGAACAGCAGCAGCAGTTCGCCGAGCAAGGATGGATGACGGTGCC
CACGGATTTGCGCAAACAAGTGCAGGATAGTCTGAAATGCTGCGGATTCA
ATGCCACCGCACCGAGCACAACTTCCGTGGTTCCCCCGTCCAATGAGCCC
TCGTGCGAGCTGATCAATCAACAGTGCTGTGCCCACTCGTCCGAGCCGGA
CTGCCGTTGCGAACCATGTGGACCCCTACTGGAGGACAAGATCGACTATG
CCTTCAAGTTGTGCGGCGGTCTGGGCATCTTCTTCAGCTTCACTGAGTTC
GTCGGCGTCTGGCTAACAGTTCGCTATCGCAATCAAAAGGATCCGCGGGG
CTTGCCCAGCGCTTTTCTCGCAAGCTTTCTAGACCAT

BO31148.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:04:10
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp97E-RG 666 CG6323-PG 61..663 17..619 3015 100 Plus
Tsp97E-RD 666 CG6323-PD 61..663 17..619 3015 100 Plus
Tsp97E-RE 687 CG6323-PE 61..591 17..547 2655 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp97E-RG 2298 CG6323-RG 176..778 17..619 3015 100 Plus
Tsp97E-RD 2635 CG6323-RD 176..778 17..619 3015 100 Plus
Tsp97E-RE 1757 CG6323-RE 176..706 17..547 2655 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:04:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26963158..26963520 547..185 1815 100 Minus
3R 32079331 3R 26964118..26964285 184..17 840 100 Minus
3R 32079331 3R 26963009..26963082 619..546 370 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:04:09 has no hits.

BO31148.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:35:17 Download gff for BO31148.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp97E-RD 184..786 17..621 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:44 Download gff for BO31148.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp97E-RF 30..632 17..621 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:43 Download gff for BO31148.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp97E-RD 176..778 17..621 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:43 Download gff for BO31148.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26963007..26963080 548..621 97 <- Minus
3R 26963158..26963520 185..547 100 <- Minus
3R 26964118..26964285 17..184 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:44 Download gff for BO31148.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22788729..22788802 548..621 97 <- Minus
arm_3R 22788880..22789242 185..547 100 <- Minus
arm_3R 22789840..22790007 17..184 100   Minus

BO31148.pep Sequence

Translation from 16 to 637

> BO31148.pep
MIGFLLIGVGVYARAASIVTNLPIVGGILACGVILICISMLGLAGAVKHH
QVMLFFYMIILFMLFLIQFSIASSCLAVNSEQQQQFAEQGWMTVPTDLRK
QVQDSLKCCGFNATAPSTTSVVPPSNEPSCELINQQCCAHSSEPDCRCEP
CGPLLEDKIDYAFKLCGGLGIFFSFTEFVGVWLTVRYRNQKDPRGLPSAF
LASFLDH

BO31148.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:50
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp97E-PG 221 CG6323-PG 21..221 1..201 1065 100 Plus
Tsp97E-PD 221 CG6323-PD 21..221 1..201 1065 100 Plus
Tsp97E-PE 228 CG6323-PE 21..218 1..198 987 94.9 Plus
Tsp97E-PH 228 CG6323-PH 21..218 1..198 987 94.9 Plus
Tsp97E-PA 228 CG6323-PA 21..218 1..198 987 94.9 Plus