BO31150.complete Sequence
682 bp assembled on 2012-03-19
GenBank Submission: KX795131
> BO31150.complete
GAAGTTATCAGTCGACATGCCTCGCACCAAGATTACAGCTCGTCGTCAGG
CCCAGCGCCAGAAGGCTGATCGCGAAGAGAAAGTGCGCCTGTCCCAAATC
AAAATGGATTCGGCTCTGGAGAAGATCGATGAGATGAGCAAGCGCTACAA
GCAAGAGGTGGACAACCAAATTAAGGTGATCCGTGGTAGGACTGATAAGC
AGCTACTGCAAATGAAGATGCCAGAATTCTTGGCTCTCGGGTTTAAGACT
TTTGCCGAATTTCAGAGGGCAGCTATTAAGCCGCCCACAACTCGCAGTTT
GTCCATCAGTCGTGGTCGAACACGAACTCCGCAGAATGCCCTGCCACCGA
GGCTTCAGGCGCATTCGGTGGACAGGGCTCTGAGTGGCGACACCATGAGC
TTTGTGCGATGGCCCCGCGCCGGAGAGATGGTGCTCTCGAAGGCGGGAAG
CCCGCTGGCCGTCCAGATGCGTCCGGATCGCTATGCGGACGTCCACATTC
CCACCAGGGGCGGCGTGATCACCGTGAAACCGCACAAGATCAACACCGTG
AAGCGGGAAGTACTGATGCAGCTGGATGAGAACACACTCAACCAGGTGAA
GACACTGAATGCCAATCTCGGATTAATTGTGGACATGGCCAACAAACTGG
GCAAATTGAAACCGGCAAGCTTTCTAGACCAT
BO31150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aust-RB | 651 | CG17009-PB | 1..648 | 17..664 | 3240 | 100 | Plus |
| aust-RA | 651 | CG17009-PA | 1..648 | 17..664 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:33:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aust-RB | 929 | CG17009-RB | 35..682 | 17..664 | 3240 | 100 | Plus |
| aust-RA | 889 | CG17009-RA | 35..682 | 17..664 | 3240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:33:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9250295..9250689 | 664..270 | 1975 | 100 | Minus |
| 2L | 23513712 | 2L | 9250753..9251008 | 272..17 | 1280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:33:22 has no hits.
BO31150.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:11 Download gff for
BO31150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aust-RA | 35..682 | 17..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:46 Download gff for
BO31150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aust-RA | 35..682 | 17..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:13:41 Download gff for
BO31150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aust-RA | 35..682 | 17..666 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:13:41 Download gff for
BO31150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9250293..9250686 | 273..666 | 99 | <- | Minus |
| 2L | 9250753..9251008 | 17..272 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:46 Download gff for
BO31150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9250293..9250686 | 273..666 | 99 | <- | Minus |
| arm_2L | 9250753..9251008 | 17..272 | 100 | | Minus |
BO31150.pep Sequence
Translation from 16 to 682
> BO31150.pep
MPRTKITARRQAQRQKADREEKVRLSQIKMDSALEKIDEMSKRYKQEVDN
QIKVIRGRTDKQLLQMKMPEFLALGFKTFAEFQRAAIKPPTTRSLSISRG
RTRTPQNALPPRLQAHSVDRALSGDTMSFVRWPRAGEMVLSKAGSPLAVQ
MRPDRYADVHIPTRGGVITVKPHKINTVKREVLMQLDENTLNQVKTLNAN
LGLIVDMANKLGKLKPASFLDH
BO31150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aust-PB | 216 | CG17009-PB | 1..216 | 1..216 | 1086 | 100 | Plus |
| aust-PA | 216 | CG17009-PA | 1..216 | 1..216 | 1086 | 100 | Plus |
| borr-PA | 315 | CG4454-PA | 175..311 | 88..210 | 236 | 41.4 | Plus |
| borr-PB | 319 | CG4454-PB | 179..315 | 88..210 | 236 | 41.4 | Plus |
| borr-PA | 315 | CG4454-PA | 1..99 | 1..98 | 178 | 41 | Plus |
| borr-PB | 319 | CG4454-PB | 1..99 | 1..98 | 178 | 41 | Plus |
