Clone BO31155 Report

Search the DGRC for BO31155

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG12947-RB
Protein status:BO31155.pep: Imported from assembly
Sequenced Size:907

Clone Sequence Records

BO31155.complete Sequence

907 bp assembled on 2012-03-19

GenBank Submission: KX796424

> BO31155.complete
GAAGTTATCAGTCGACATGAGATTGATCTGGCTGCAGCTCCTGGCTGCTG
GGGTTGCTCTCTATCTGGCAAACGGTTGTGCAACGGCCGCCAAGGCATCC
ACAAGCCGCGGAGTTGCACAATACAAGCTCCCGCTCCCTGCTCCATTGCC
AGACCACGAATCTGTCGCGGTTTCAGGCGCGGATCAGGCTAGGCGACAGC
AGCAGCAGCAGCAGAAGGGAGCATCCAACCAGCGAAGGCGCACTCAGGTC
GTGCGGCGGCGCAGGCCCTCCTCTACAACAACTACTTCATCCACCTCAAC
CACAACGACAACCACATCGACAACAACTACAACGACGACAACAACAACTC
CGCGTCCCAGCCTGGCCAACGGCTTCAACTTCTTTAATCGGAACTTCTGG
AGTTTCGGCCAGCAGAGTCTGGTGGCAGTGCGTCCGCCCACCAAGCAGGC
CCATCCGCCGAAAAAGTTTAGTCCCAAGGACGAAAAGTCCGGCCAACGAA
AAGTGGCCAAGACCACTAGGAAACCGATGGATCAGAGAACGAGTACAACT
AGTCGAAGCGCAACAACAACTAGCACACAAAAACCCACTACAGATGGACC
CTTTCGCATTGCACTGCCCACCTTGAACTTCCCACGCGACAACCAGGATA
AGAACAGGGATAGGGAAACGGAGAAGGGCAAGAGGTCGGCTGCCGAGCTG
CGCTTGAGGTTCGATTGTCCGCGGGAGAACGAGGTGAGGTTCCAGCTATT
CCCCAAGATCTGCAAGGCGGATCGAGACTGTGCCGTGTGGCAACGGGATG
AGCTGTGCTGTGATATCTTTGGAGCAAGCAGCTGTGTCTCTGGCGTTCCA
AAGCCGCTAGAGGAGACTCCACATGCTCGTAAGTGGGTTGCAAGCTTTCT
AGACCAT

BO31155.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:36:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG12947-RC 1275 CG12947-PC 1..862 17..878 4310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG12947-RC 1695 CG12947-RC 124..985 17..878 4310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9781697..9782238 348..889 2710 100 Plus
3R 32079331 3R 9780187..9780517 17..347 1655 100 Plus
Blast to na_te.dros performed 2014-11-28 05:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2803..2990 192..381 142 57 Plus

BO31155.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:12 Download gff for BO31155.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RB 124..996 17..891 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:54 Download gff for BO31155.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RC 124..985 17..878 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:14:36 Download gff for BO31155.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RC 124..985 17..878 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:14:36 Download gff for BO31155.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9780187..9780517 17..347 100 -> Plus
3R 9781697..9782238 348..891 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:54 Download gff for BO31155.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5605909..5606239 17..347 100 -> Plus
arm_3R 5607419..5607960 348..891 99   Plus

BO31155.pep Sequence

Translation from 16 to 907

> BO31155.pep
MRLIWLQLLAAGVALYLANGCATAAKASTSRGVAQYKLPLPAPLPDHESV
AVSGADQARRQQQQQQKGASNQRRRTQVVRRRRPSSTTTTSSTSTTTTTT
STTTTTTTTTTPRPSLANGFNFFNRNFWSFGQQSLVAVRPPTKQAHPPKK
FSPKDEKSGQRKVAKTTRKPMDQRTSTTSRSATTTSTQKPTTDGPFRIAL
PTLNFPRDNQDKNRDRETEKGKRSAAELRLRFDCPRENEVRFQLFPKICK
ADRDCAVWQRDELCCDIFGASSCVSGVPKPLEETPHARKWVASFLDH

BO31155.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG12947-PC 424 CG12947-PC 1..287 1..287 1500 100 Plus