BO31159.complete Sequence
250 bp assembled on 2012-03-19
GenBank Submission: KX798413
> BO31159.complete
GAAGTTATCAGTTGACATGATGCAAATCAAGTTCCTGTTCACCTTCCTCG
CTCTGCTGATGATGGTCATCCTGGGCGCCAAGGAAGCCGATGCCGACTGC
CTTTCCGGAAGGTACAGAGGTCCCTGTGCCGTCTGGGACAACGAGACATG
CAGGCGGGTTTGCCGAGAGGAGGGACGAGGACGAGTGAGTGGTCACTGCA
GTGCCAGGCTGCAATGCTGGTGCGAAGGATGCGCAAGCTTTCTAGACCAT
BO31159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drsl6-RA | 219 | CG32268-PA | 1..216 | 17..232 | 1080 | 100 | Plus |
| Drsl5-RA | 210 | CG10812-PA | 1..207 | 20..232 | 415 | 80.8 | Plus |
| Drs-RA | 213 | CG10810-PA | 1..161 | 17..177 | 400 | 83.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:32:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drsl6-RA | 387 | CG32268-RA | 57..272 | 17..232 | 1080 | 100 | Plus |
| Drsl5-RA | 364 | CG10812-RA | 55..261 | 20..232 | 415 | 80.8 | Plus |
| Drs-RA | 387 | CG10810-RA | 64..224 | 17..177 | 400 | 83.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:32:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3336147..3336362 | 232..17 | 1080 | 100 | Minus |
| 3L | 28110227 | 3L | 3316835..3317041 | 20..232 | 415 | 80.8 | Plus |
| 3L | 28110227 | 3L | 3369619..3369779 | 17..177 | 400 | 83.2 | Plus |
| 3L | 28110227 | 3L | 3314365..3314584 | 7..232 | 300 | 76.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:32:34 has no hits.
BO31159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:09 Download gff for
BO31159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dro6-RA | 57..272 | 17..234 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:36 Download gff for
BO31159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drsl6-RA | 57..272 | 17..234 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:13:21 Download gff for
BO31159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drsl6-RA | 57..272 | 17..234 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:13:21 Download gff for
BO31159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3336144..3336362 | 17..234 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:36 Download gff for
BO31159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3336144..3336362 | 17..234 | 99 | | Minus |
BO31159.pep Sequence
Translation from 16 to 250
> BO31159.pep
MMQIKFLFTFLALLMMVILGAKEADADCLSGRYRGPCAVWDNETCRRVCR
EEGRGRVSGHCSARLQCWCEGCASFLDH
BO31159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drsl6-PA | 72 | CG32268-PA | 1..72 | 1..72 | 403 | 100 | Plus |
| Drs-PA | 70 | CG10810-PA | 1..70 | 1..72 | 324 | 77.8 | Plus |
| Drsl5-PA | 69 | CG10812-PA | 1..69 | 2..72 | 316 | 78.9 | Plus |
| Drsl2-PA | 70 | CG32279-PA | 1..70 | 1..72 | 299 | 69.4 | Plus |
| Drsl1-PA | 69 | CG32274-PA | 1..69 | 2..72 | 247 | 60.6 | Plus |
