BO31160.complete Sequence
742 bp assembled on 2012-03-19
GenBank Submission: KX797877
> BO31160.complete
GAAGTTATCAGTCGACATGTTTATTGTGGCTGTAACTGGCGGTATCGCCA
CGGGAAAAAGTACCATCAGCAAAGTGTTCGAACGCCAGGGTATTCCAGTC
ATCGACGCCGACAAAATCGCCAGGGAGATTGTGGAACCAGGTCAGCCGTG
CTGGCGGCAGATTCGGGAAGTCTTCGGAGATGAGGTCCTCCTGCCCAGCA
AGGAGATCAACCGCGCTGTTCTGGGTAAGATGATCTTCGAGGACAAGGAG
CTGCGCGGAAAGCTGAACAAGATCACCCATCCGACCATCCATCGCAAGAT
CTTTTGGCAAGTGTGCAAGCTGCTGGTCACGGGGCACGCGTGGATCGTCC
TCGACCTGCCACTGCTCTTTGAGACCGGCGTGCTGATGGACTTTATACAC
AAGATCGTCTGTGTAACCTGCGACTCGGACAAGCAGCTGGAGCGATTAAT
AGCCCGCAATGAGCTCTCGGAATCGGAAGCCCGGCATCGCGTCGATTCAC
AAATGCCGCTGGACAAGAAGTGCGAGAAGTCTCACTTCGTCATTGACAAT
AACGGGAGCGTGGAGGAGGCGGAGAGCTCGGCCATGAGCATTTACAACCT
GATGCGCGACTCCAAGCAGCACTGGCTGAACCGCATCAGCTTCCTGGGGC
TGTTCCTAATCGTGGGCTTCACAATATATATGCTGCTGAAGGTGTTCAAC
CGGCTGCCCGAGTCCTGGCAGATGGCAAGCTTTCTAGACCAT
BO31160.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:33:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpck-RA | 711 | CG1939-PA | 1..708 | 17..724 | 3540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:33:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpck-RA | 914 | CG1939-RA | 96..803 | 17..724 | 3540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:32:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7082836..7083140 | 420..724 | 1525 | 100 | Plus |
| 3R | 32079331 | 3R | 7082474..7082765 | 129..420 | 1460 | 100 | Plus |
| 3R | 32079331 | 3R | 7082277..7082388 | 17..128 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:33:00 has no hits.
BO31160.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:10 Download gff for
BO31160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpck-RA | 95..796 | 23..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:41 Download gff for
BO31160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpck-RA | 102..803 | 23..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:13:31 Download gff for
BO31160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpck-RA | 102..803 | 23..726 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:13:31 Download gff for
BO31160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7082837..7083140 | 421..726 | 99 | | Plus |
| 3R | 7082283..7082388 | 23..128 | 100 | -> | Plus |
| 3R | 7082474..7082765 | 129..420 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:41 Download gff for
BO31160.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2908005..2908110 | 23..128 | 100 | -> | Plus |
| arm_3R | 2908196..2908487 | 129..420 | 100 | -> | Plus |
| arm_3R | 2908559..2908862 | 421..726 | 99 | | Plus |
BO31160.pep Sequence
Translation from 16 to 742
> BO31160.pep
MFIVAVTGGIATGKSTISKVFERQGIPVIDADKIAREIVEPGQPCWRQIR
EVFGDEVLLPSKEINRAVLGKMIFEDKELRGKLNKITHPTIHRKIFWQVC
KLLVTGHAWIVLDLPLLFETGVLMDFIHKIVCVTCDSDKQLERLIARNEL
SESEARHRVDSQMPLDKKCEKSHFVIDNNGSVEEAESSAMSIYNLMRDSK
QHWLNRISFLGLFLIVGFTIYMLLKVFNRLPESWQMASFLDH
BO31160.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpck-PA | 236 | CG1939-PA | 1..236 | 1..236 | 1226 | 100 | Plus |
| Ppat-Dpck-PA | 518 | CG10575-PA | 312..507 | 2..196 | 243 | 29.9 | Plus |
