Clone BO31162 Report

Search the DGRC for BO31162

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptCG43098-RA
Protein status:BO31162.pep: Imported from assembly
Sequenced Size:514

Clone Sequence Records

BO31162.complete Sequence

514 bp assembled on 2012-03-19

GenBank Submission: KX794471

> BO31162.complete
GAAGTTATCAGTCGACATGAGCGCCAGAACTAGGCGCTACGAACGTGACG
AAGTAGTGCAGCTTCTTAGAAACCCATCAAATAAGCCCCAGCGAATTATA
TTAATATTGGATTCAAGATTTATCCCTGAAGAACTGACGACCGCCAACCG
TGTGAGGCCTGACATTCACATATTTTCCGGACCTGCAATACCAAATTTGT
TAGGCGGGTCTTTCATGCCGCTGAATCTGTCCAATGCGAACTCGTGGGTG
TACTCTGTTCTATTGCAAAGTCCAATAGTTCGCCCTGCTTATCCTCGTCG
AGTTCGCTACACTTCCGTGTCTCAGTGGAGTCCTCCAATGCGTACACGAA
TGGGACGGAACGAGATTTTTCCGGAGGACATTGGAGGAGAGATACTGACG
GCAATGATGGTGAACCCAGAATTAGACACACTAATGCGCCTCGATCCCAT
TAAAGCCATGTCCCTGATCCTGCGTATTGCAAACTACTTTCTCCACGCAA
GCTTTCTAGACCAT

BO31162.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:02:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG43098-RA 483 CG43098-PA 1..480 17..496 2400 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG43098-RA 657 CG43098-RA 65..544 17..496 2400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3659132..3659611 17..496 2400 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:02:24 has no hits.

BO31162.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:16 Download gff for BO31162.complete
Subject Subject Range Query Range Percent Splice Strand
CG43098-RA 57..536 17..498 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:45 Download gff for BO31162.complete
Subject Subject Range Query Range Percent Splice Strand
CG43098-RA 65..544 17..498 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:17:52 Download gff for BO31162.complete
Subject Subject Range Query Range Percent Splice Strand
CG43098-RA 65..544 17..498 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:17:52 Download gff for BO31162.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3659132..3659611 17..498 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:45 Download gff for BO31162.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3659132..3659611 17..498 99   Plus

BO31162.pep Sequence

Translation from 16 to 514

> BO31162.pep
MSARTRRYERDEVVQLLRNPSNKPQRIILILDSRFIPEELTTANRVRPDI
HIFSGPAIPNLLGGSFMPLNLSNANSWVYSVLLQSPIVRPAYPRRVRYTS
VSQWSPPMRTRMGRNEIFPEDIGGEILTAMMVNPELDTLMRLDPIKAMSL
ILRIANYFLHASFLDH

BO31162.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG43098-PA 160 CG43098-PA 1..160 1..160 823 100 Plus