Clone BO31164 Report

Search the DGRC for BO31164

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG1161-RA
Protein status:BO31164.pep: Imported from assembly
Sequenced Size:715

Clone Sequence Records

BO31164.complete Sequence

715 bp assembled on 2012-03-19

GenBank Submission: KX798236

> BO31164.complete
GAAGTTATCAGTCGACATGGCACACAAGCGCCTGTTCGTCTACGCGGTGC
TACTGGTGATATGTTATTTGGTTGGCGTGACATGGGCTGAGACTGCGGCG
CAGACATTCCCAGCGATCGGCACCAACAGCAACAACAACAGCAATGCTCA
ACCTGCTCCTGTGCCTGCACCTGCAGCTCCAGCGGCTGCAGCTCCACTAG
CCAAGCAAGTTTCAGCTCCCACTGCCGCCCCTCCGGCCAAGGTCATCGGC
CAGCCTGTGCTCGCTGCTCCAGGCAAAAATTCTTCCAATTCCAGCAGCAC
AACTGAGTGCGTCTGTGCCGGTGCCCTGCTGCCCCGTTTGGATGCCAATG
GCAAGGAGCTGCCCATATGCGCCGAGTGCAAGTGCTCCCATGTGGCGAGA
AATACGACGCTGATAAAGGTCGTGGTCATTATTGTGATTTGGATCATCTC
CATTTTAGTAATATACATGCTCTTCCTGATGTGCCTGGACCCGTTGCTGA
ACAAGCGAGTGAAGGCGAACTACCAGGAGCACACCAACGAAGATGATGAA
CCAACGCCGCCCCTGCCAGCCGTCAACAACCAGGAGCTCAGTGCCAGAGC
CAATGTCCTCAATCGTGTGGGCCACCAGCAGGACAAGTGGAAGCGGCAGG
TGCGCGAGCAGAGACGCCACATCTACGACAGGCATACCATGCTAAACGCA
AGCTTTCTAGACCAT

BO31164.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:02:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG1161-RA 684 CG1161-PA 1..681 17..697 3405 100 Plus
CG1161-RC 666 CG1161-PC 1..529 17..545 2645 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:02:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG1161-RA 945 CG1161-RA 94..774 17..697 3405 100 Plus
CG1161-RC 1241 CG1161-RC 94..622 17..545 2645 100 Plus
CG1161-RC 1241 CG1161-RC 918..1070 545..697 765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5355326..5355550 85..309 1125 100 Plus
3R 32079331 3R 5356425..5356577 545..697 765 100 Plus
3R 32079331 3R 5356001..5356129 417..545 645 100 Plus
3R 32079331 3R 5355833..5355944 309..420 560 100 Plus
3R 32079331 3R 5355185..5355254 17..86 350 100 Plus
Blast to na_te.dros performed 2014-11-28 04:02:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6851 116..228 152 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2301..2393 115..208 143 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2452..2571 116..224 142 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2323..2424 116..222 136 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2783..2871 97..192 129 65.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..6875 116..237 128 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6872 116..216 124 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2382..2502 121..250 114 60 Plus

BO31164.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:17 Download gff for BO31164.complete
Subject Subject Range Query Range Percent Splice Strand
CG1161-RA 86..766 17..699 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:47 Download gff for BO31164.complete
Subject Subject Range Query Range Percent Splice Strand
CG1161-RA 94..774 17..699 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:17:54 Download gff for BO31164.complete
Subject Subject Range Query Range Percent Splice Strand
CG1161-RA 94..774 17..699 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:17:54 Download gff for BO31164.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5355185..5355253 17..85 100 -> Plus
3R 5355327..5355550 86..309 100 -> Plus
3R 5355834..5355942 310..418 100 -> Plus
3R 5356003..5356128 419..544 100 -> Plus
3R 5356425..5356577 545..699 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:47 Download gff for BO31164.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1182147..1182299 545..699 98   Plus
arm_3R 1181556..1181664 310..418 100 -> Plus
arm_3R 1181725..1181850 419..544 100 -> Plus
arm_3R 1180907..1180975 17..85 100 -> Plus
arm_3R 1181049..1181272 86..309 100 -> Plus

BO31164.pep Sequence

Translation from 16 to 715

> BO31164.pep
MAHKRLFVYAVLLVICYLVGVTWAETAAQTFPAIGTNSNNNSNAQPAPVP
APAAPAAAAPLAKQVSAPTAAPPAKVIGQPVLAAPGKNSSNSSSTTECVC
AGALLPRLDANGKELPICAECKCSHVARNTTLIKVVVIIVIWIISILVIY
MLFLMCLDPLLNKRVKANYQEHTNEDDEPTPPLPAVNNQELSARANVLNR
VGHQQDKWKRQVREQRRHIYDRHTMLNASFLDH

BO31164.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG1161-PA 227 CG1161-PA 1..227 1..227 1183 100 Plus
CG1161-PC 221 CG1161-PC 1..176 1..176 907 100 Plus