BO31164.complete Sequence
715 bp assembled on 2012-03-19
GenBank Submission: KX798236
> BO31164.complete
GAAGTTATCAGTCGACATGGCACACAAGCGCCTGTTCGTCTACGCGGTGC
TACTGGTGATATGTTATTTGGTTGGCGTGACATGGGCTGAGACTGCGGCG
CAGACATTCCCAGCGATCGGCACCAACAGCAACAACAACAGCAATGCTCA
ACCTGCTCCTGTGCCTGCACCTGCAGCTCCAGCGGCTGCAGCTCCACTAG
CCAAGCAAGTTTCAGCTCCCACTGCCGCCCCTCCGGCCAAGGTCATCGGC
CAGCCTGTGCTCGCTGCTCCAGGCAAAAATTCTTCCAATTCCAGCAGCAC
AACTGAGTGCGTCTGTGCCGGTGCCCTGCTGCCCCGTTTGGATGCCAATG
GCAAGGAGCTGCCCATATGCGCCGAGTGCAAGTGCTCCCATGTGGCGAGA
AATACGACGCTGATAAAGGTCGTGGTCATTATTGTGATTTGGATCATCTC
CATTTTAGTAATATACATGCTCTTCCTGATGTGCCTGGACCCGTTGCTGA
ACAAGCGAGTGAAGGCGAACTACCAGGAGCACACCAACGAAGATGATGAA
CCAACGCCGCCCCTGCCAGCCGTCAACAACCAGGAGCTCAGTGCCAGAGC
CAATGTCCTCAATCGTGTGGGCCACCAGCAGGACAAGTGGAAGCGGCAGG
TGCGCGAGCAGAGACGCCACATCTACGACAGGCATACCATGCTAAACGCA
AGCTTTCTAGACCAT
BO31164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:02:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1161-RA | 684 | CG1161-PA | 1..681 | 17..697 | 3405 | 100 | Plus |
CG1161-RC | 666 | CG1161-PC | 1..529 | 17..545 | 2645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:02:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1161-RA | 945 | CG1161-RA | 94..774 | 17..697 | 3405 | 100 | Plus |
CG1161-RC | 1241 | CG1161-RC | 94..622 | 17..545 | 2645 | 100 | Plus |
CG1161-RC | 1241 | CG1161-RC | 918..1070 | 545..697 | 765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:02:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5355326..5355550 | 85..309 | 1125 | 100 | Plus |
3R | 32079331 | 3R | 5356425..5356577 | 545..697 | 765 | 100 | Plus |
3R | 32079331 | 3R | 5356001..5356129 | 417..545 | 645 | 100 | Plus |
3R | 32079331 | 3R | 5355833..5355944 | 309..420 | 560 | 100 | Plus |
3R | 32079331 | 3R | 5355185..5355254 | 17..86 | 350 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:02:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6851 | 116..228 | 152 | 61.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2301..2393 | 115..208 | 143 | 64.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2452..2571 | 116..224 | 142 | 64.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2323..2424 | 116..222 | 136 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2783..2871 | 97..192 | 129 | 65.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6875 | 116..237 | 128 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6872 | 116..216 | 124 | 61.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2502 | 121..250 | 114 | 60 | Plus |
BO31164.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:17 Download gff for
BO31164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1161-RA | 86..766 | 17..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:47 Download gff for
BO31164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1161-RA | 94..774 | 17..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:17:54 Download gff for
BO31164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1161-RA | 94..774 | 17..699 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:17:54 Download gff for
BO31164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5355185..5355253 | 17..85 | 100 | -> | Plus |
3R | 5355327..5355550 | 86..309 | 100 | -> | Plus |
3R | 5355834..5355942 | 310..418 | 100 | -> | Plus |
3R | 5356003..5356128 | 419..544 | 100 | -> | Plus |
3R | 5356425..5356577 | 545..699 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:47 Download gff for
BO31164.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1182147..1182299 | 545..699 | 98 | | Plus |
arm_3R | 1181556..1181664 | 310..418 | 100 | -> | Plus |
arm_3R | 1181725..1181850 | 419..544 | 100 | -> | Plus |
arm_3R | 1180907..1180975 | 17..85 | 100 | -> | Plus |
arm_3R | 1181049..1181272 | 86..309 | 100 | -> | Plus |
BO31164.pep Sequence
Translation from 16 to 715
> BO31164.pep
MAHKRLFVYAVLLVICYLVGVTWAETAAQTFPAIGTNSNNNSNAQPAPVP
APAAPAAAAPLAKQVSAPTAAPPAKVIGQPVLAAPGKNSSNSSSTTECVC
AGALLPRLDANGKELPICAECKCSHVARNTTLIKVVVIIVIWIISILVIY
MLFLMCLDPLLNKRVKANYQEHTNEDDEPTPPLPAVNNQELSARANVLNR
VGHQQDKWKRQVREQRRHIYDRHTMLNASFLDH
BO31164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1161-PA | 227 | CG1161-PA | 1..227 | 1..227 | 1183 | 100 | Plus |
CG1161-PC | 221 | CG1161-PC | 1..176 | 1..176 | 907 | 100 | Plus |