BO31169.complete Sequence
2911 bp assembled on 2012-04-06
GenBank Submission: KX794594
> BO31169.complete
GAAGTTATCAGTCGACATGGAGGGTGCCAGTCGCAGCAGGAACTCCTCCA
CGAGCCACAGTCAGGGTCGCGGCCAGGACATTGAGGATCTCAAGCAAGAC
ATTCCCTACTTTGACGAACCGCCGGCGCTCGATGCCGATCTGCTTGTTCT
GGGCAAGAGCGAATGCCAGCTGGACGAGCTGGCCTGGGATCGTGATGCGG
ATGGGGATGCGGATGCGCCGCTAGAGACGGCACCCGCCGTCGATCTCGAG
GAGGATAACTATCCGGATGAGAACGAGAGCTCGGTGCTGGGCAGCGACTA
TGCGCCCAGTGGGAGTGGGAGTGGTGCGAACAGTTTCTACCAATCGCCGA
CGCCCTCTGCCACCGGATCTGGTTGCGATCTGATGCTCCGACCGCCATCG
AATTCCATGTACCATTTCAATTACCGATCGCCGGGTAGTCCAATGCCTGT
GGCTCCAGGAGTGACCAACTCACGAGGTCTGCATCCGTATGCACATTCCC
CGGCGCATGGTAATCCGCCTGGTTTCTATCCGAATATGTGGTATCCGAAT
GCACCATACGGATCGGCAGGAGCGGCAGGATCCGCCGGAGGAGCCGTTTC
CGGTGGCAGGTACATGGGCTATGGACCGGGCGGAGTGCCAGGAGGAACCA
ATTCGGGTCCGGGTGCGGGTCCTGGAGCAATGCAAGCTGCGTATCCTGGA
CACTCGGCTCACATGCATGCGCTGCATCATCAATATCCGCAGCCACATCC
GCACGCCCACCACCCGCAGCATCCGCATCATTCACCACATCCGCACCACC
CGCATCCGCACGAGACCATGATGGAGATGTTTCAGCTCTCGAATAGTGGT
CGAGAGGCGCGAAACCGAGCGGAAAAGAATCGGCGGGACAAACTGAACGG
ATCCATCCAGGAACTATCCACAATGGTGCCCCACGTGGCGGAGTCGCCAC
GTCGAGTGGACAAAACAGCCGTTCTGCGCTTTGCCGCCCATGCATTGCGA
TTGAAGCATGCCTTTGGCAACAGTCTGATGCAGCAGCGACCACAGATCAC
GGACACCCTGATGGACATGCTGGACAGCTTCTTTCTCACACTCACCTGCC
ATGGCCACATACTGCTGATCTCGGCCAGCATTGAACAGCATTTGGGCCAC
TGTCAGTCGGATTTGTATGGTCAGAGCATTATGCAGATCACGCATCCCGA
GGACCAGAACATGCTCAAACAGCAGCTGATCCCCACCGAGTTGGAGAACC
TCTTCGATGCCCATGGCGATTCGGATGCGGAAGGTGAGCCCCGCCAGCGG
AGCAAAGCCGAGGAGGATGCCATCGATCGCAAGTTGCGCGAGGATAGACG
CAGTTTTCGCGTGAGATTGGCTCGTGCTGGTCCCAGATCGGAACCCACCG
CCTACGAAGTGGTCAAGATCGATGGCTGCTTTCGGCGTAGTGACGAAGCG
CCACGCGGCGTACGCTCCAATCATTTCAGCTCCAATCTGCAGTTAATCAG
GCGGACACGCGGTCGTGACGATGTCATTCCACTGCACACCATTAGCGGCA
ATGATATCATTCTGACTGGCTGCGCCCGGATAATCCGTCCGCCGAAGATC
GCCAGTCGGCTGATCGATGCCAATACACTGGAGTACAAAACCCGCCACTT
GATTGACGGCAGGATCATCGACTGCGACCAGAGAATTGGTATCGTGGCCG
GCTACATGACGGATGAGGTGCGCAATCTCAGTCCCTTCACCTTCATGCAC
AACGACGATGTGCGCTGGGTGATCGTGGCCCTGCGTCAAATGTACGACTG
CAATAGTTCATATGGCGAGTCCACTTACCGGCTATTCACCCGCAACGGGA
ACATCATCTACCTGCAATCGAAGGGCTATCTGGAGATCGACAAGGAGACG
AACAAGGTGCACTCCTTTGTCTGTGTGAACACGCTGCTTGGCGAGGAGGA
GGGCAAGCGGCGGGTGCAGGAGATGAAGAAGAAGTTCTCGGTAATTATCA
ACACACAGATACCGCAGTCGACCATCGATGTGCCCGCCTCCGAGCATCCG
GCTCTGCTGGAGAAGGCCGTGCTGCGGCTCATCCAGAATCTGCAGAAGTC
TGGCGAGAATGGTGGCCACGATGACGGCGACGAGGACGATGATGCGCAGG
ATGGCGACGACGACGAGGAGGATGATGATGACGATCAGGACGATGGCGCG
CGCAGCATGTCCGAATTCGGTGATCCCTATGGCAGTCATCACGGCCGATC
GCATCATGGTTCCTCCGCTCTATCCTCACACGGGCATGGTAACGCCAAAA
CCCCACCCCTGGCACTGGTTCCGCCGGAAGCGTCCTCTGTCAAATCGGCG
ATTACGAAGAGTATCAGTGTGGTCAACGTTACGGCGGCCAAACATTTGCG
TGGTATCCACGCATCGACGGCAGTCAAATCGCCCAGCTCCTTGGGCAGCT
GCACCTGCAGCGATTCGCATTCGCCTTGCGACTTCTGCCAGGGTGCACCC
ACGACCGATCTCCAGGCGGTTGGGTCCAATCTGAAGAGGGGCAGCACTGC
TCACGTGGAAACCGAAGAGAAGCTGTCCAAGCGGCGTTTTATACCCAGCA
CTGAAATCGAGCATGTGCTGCACACATCTTTGGACCAAATCGGGCGTAAT
CTTACCCAGCAGCTCAATGTGGCCAGGAATTTGCGGGAACAGAGTCAGCG
ATACGAGTTGCCCCATGCCAATCAGCGATTCGATGAGATCATGCAGGAGC
ACCAGAAGCAGAGTGAACTGTATGTGAACATCAAGAGCGAGTACGAGGTG
CAGCTGCAGCATAAGGCAAGCACCCGGAAGTCATCGGATTCGGATCGGAA
TCAGGAGCAGCCGCCGCCGCCGCTTCAGGAGGACGACCAGGACGCAAGCT
TTCTAGACCAT
BO31169.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:21:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gce-RE | 2880 | CG42739-PE | 1..2877 | 17..2893 | 14385 | 100 | Plus |
| gce-RD | 2880 | CG42739-PD | 1..2877 | 17..2893 | 14385 | 100 | Plus |
| gce-RC | 2880 | CG42739-PC | 1..2877 | 17..2893 | 14385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:21:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gce-RE | 5120 | CG42739-RE | 930..3808 | 15..2893 | 14395 | 100 | Plus |
| gce-RD | 5063 | CG42739-RD | 873..3751 | 15..2893 | 14395 | 100 | Plus |
| gce-RC | 5524 | CG42739-RC | 1334..4212 | 15..2893 | 14395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:21:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15310385..15311216 | 15..846 | 4160 | 100 | Plus |
| X | 23542271 | X | 15316421..15317233 | 1791..2603 | 4065 | 100 | Plus |
| X | 23542271 | X | 15315329..15315689 | 1010..1370 | 1790 | 99.7 | Plus |
| X | 23542271 | X | 15316119..15316350 | 1559..1790 | 1160 | 100 | Plus |
| X | 23542271 | X | 15315785..15315979 | 1364..1558 | 975 | 100 | Plus |
| X | 23542271 | X | 15315085..15315250 | 845..1010 | 830 | 100 | Plus |
| X | 23542271 | X | 15317612..15317762 | 2743..2893 | 755 | 100 | Plus |
| X | 23542271 | X | 15317342..15317482 | 2603..2743 | 705 | 100 | Plus |
| X | 23542271 | X | 11618228..11618513 | 1716..2001 | 425 | 76.6 | Plus |
| X | 23542271 | X | 11617243..11617429 | 1049..1235 | 275 | 76.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:21:44 has no hits.
BO31169.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:46:45 Download gff for
BO31169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gce-RD | 875..3751 | 17..2895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:20 Download gff for
BO31169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gce-RC | 1336..4212 | 17..2895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:38 Download gff for
BO31169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gce-RC | 1336..4212 | 17..2895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:38 Download gff for
BO31169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15317613..15317762 | 2744..2895 | 98 | | Plus |
| X | 15310387..15311216 | 17..846 | 100 | -> | Plus |
| X | 15315087..15315250 | 847..1010 | 100 | -> | Plus |
| X | 15315330..15315684 | 1011..1365 | 100 | -> | Plus |
| X | 15315787..15315979 | 1366..1558 | 100 | -> | Plus |
| X | 15316119..15316350 | 1559..1790 | 100 | -> | Plus |
| X | 15316421..15317233 | 1791..2603 | 100 | -> | Plus |
| X | 15317343..15317482 | 2604..2743 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:20 Download gff for
BO31169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15204420..15205249 | 17..846 | 100 | -> | Plus |
| arm_X | 15209120..15209283 | 847..1010 | 100 | -> | Plus |
| arm_X | 15209363..15209717 | 1011..1365 | 100 | -> | Plus |
| arm_X | 15209820..15210012 | 1366..1558 | 100 | -> | Plus |
| arm_X | 15210152..15210383 | 1559..1790 | 100 | -> | Plus |
| arm_X | 15210454..15211266 | 1791..2603 | 100 | -> | Plus |
| arm_X | 15211376..15211515 | 2604..2743 | 100 | -> | Plus |
| arm_X | 15211646..15211795 | 2744..2895 | 98 | | Plus |
BO31169.pep Sequence
Translation from 16 to 2911
> BO31169.pep
MEGASRSRNSSTSHSQGRGQDIEDLKQDIPYFDEPPALDADLLVLGKSEC
QLDELAWDRDADGDADAPLETAPAVDLEEDNYPDENESSVLGSDYAPSGS
GSGANSFYQSPTPSATGSGCDLMLRPPSNSMYHFNYRSPGSPMPVAPGVT
NSRGLHPYAHSPAHGNPPGFYPNMWYPNAPYGSAGAAGSAGGAVSGGRYM
GYGPGGVPGGTNSGPGAGPGAMQAAYPGHSAHMHALHHQYPQPHPHAHHP
QHPHHSPHPHHPHPHETMMEMFQLSNSGREARNRAEKNRRDKLNGSIQEL
STMVPHVAESPRRVDKTAVLRFAAHALRLKHAFGNSLMQQRPQITDTLMD
MLDSFFLTLTCHGHILLISASIEQHLGHCQSDLYGQSIMQITHPEDQNML
KQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLREDRRSFRVR
LARAGPRSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGR
DDVIPLHTISGNDIILTGCARIIRPPKIASRLIDANTLEYKTRHLIDGRI
IDCDQRIGIVAGYMTDEVRNLSPFTFMHNDDVRWVIVALRQMYDCNSSYG
ESTYRLFTRNGNIIYLQSKGYLEIDKETNKVHSFVCVNTLLGEEEGKRRV
QEMKKKFSVIINTQIPQSTIDVPASEHPALLEKAVLRLIQNLQKSGENGG
HDDGDEDDDAQDGDDDEEDDDDDQDDGARSMSEFGDPYGSHHGRSHHGSS
ALSSHGHGNAKTPPLALVPPEASSVKSAITKSISVVNVTAAKHLRGIHAS
TAVKSPSSLGSCTCSDSHSPCDFCQGAPTTDLQAVGSNLKRGSTAHVETE
EKLSKRRFIPSTEIEHVLHTSLDQIGRNLTQQLNVARNLREQSQRYELPH
ANQRFDEIMQEHQKQSELYVNIKSEYEVQLQHKASTRKSSDSDRNQEQPP
PPLQEDDQDASFLDH
BO31169.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gce-PE | 959 | CG42739-PE | 1..959 | 1..959 | 5103 | 100 | Plus |
| gce-PD | 959 | CG42739-PD | 1..959 | 1..959 | 5103 | 100 | Plus |
| gce-PC | 959 | CG15032-PB | 1..959 | 1..959 | 5103 | 100 | Plus |
| gce-PG | 959 | CG42739-PG | 1..959 | 1..959 | 5103 | 100 | Plus |
| Met-PB | 716 | CG1705-PB | 36..634 | 277..798 | 1277 | 48 | Plus |
