BO31171.complete Sequence
451 bp assembled on 2012-03-19
GenBank Submission: KX795675
> BO31171.complete
GAAGTTATCAGTCGACATGTTTAGTTTTCTGAGCATTGAGGCTAGGTCAT
TGGAGGAAACCTCTGTCAAGACGAAACGCGATACCGACTGGTGGACTATC
CTCGAGGATATACTCTATGACAATGATAGTGATAGTGATGATGCCGGCGA
TGAGAACGTTTTGATTTGTCGTAACTGCACGGTAGTTGTTCAAGCTGCTC
CAAACGCCACAGCGAATGGAAGCACTGTAGCTCCGCAGGCAGGTGGAGCA
GCTCCAGGGAGTTCACCAGGTGCGCCTGCCACTCCTCCTGGCTCGACTCC
TGCAGTTCCAGCCACAGTTGCACCCGAAACGCCTGCTCCGTCGGCACCTG
CGACATCGCCACAACCTGTAGTAACTGCCCTACCCACAGCTGCCCCACCT
ACAGCTGCCCCACCCACAGCTGCCCCTGGTGGTGCAAGCTTTCTAGACCA
T
BO31171.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:37:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7443-RA | 420 | CG7443-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
CG7443-RB | 396 | CG7443-PB | 146..393 | 186..433 | 1240 | 100 | Plus |
CG7443-RB | 396 | CG7443-PB | 1..146 | 17..162 | 730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:37:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7443-RA | 616 | CG7443-RA | 62..478 | 17..433 | 2085 | 100 | Plus |
CG7443-RB | 592 | CG7443-RB | 207..454 | 186..433 | 1240 | 100 | Plus |
CG7443-RB | 592 | CG7443-RB | 62..207 | 17..162 | 730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:37:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8324627..8324898 | 162..433 | 1360 | 100 | Plus |
3R | 32079331 | 3R | 8324485..8324573 | 73..161 | 445 | 100 | Plus |
3R | 32079331 | 3R | 8324377..8324433 | 17..73 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:37:55 has no hits.
BO31171.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:15 Download gff for
BO31171.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7443-RA | 49..459 | 23..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:10 Download gff for
BO31171.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7443-RA | 68..478 | 23..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:15:13 Download gff for
BO31171.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7443-RA | 68..478 | 23..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:15:13 Download gff for
BO31171.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8324383..8324433 | 23..73 | 100 | -> | Plus |
3R | 8324486..8324573 | 74..161 | 100 | -> | Plus |
3R | 8324627..8324898 | 162..435 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:10 Download gff for
BO31171.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4150208..4150295 | 74..161 | 100 | -> | Plus |
arm_3R | 4150349..4150620 | 162..435 | 99 | | Plus |
arm_3R | 4150105..4150155 | 23..73 | 100 | -> | Plus |
BO31171.pep Sequence
Translation from 16 to 451
> BO31171.pep
MFSFLSIEARSLEETSVKTKRDTDWWTILEDILYDNDSDSDDAGDENVLI
CRNCTVVVQAAPNATANGSTVAPQAGGAAPGSSPGAPATPPGSTPAVPAT
VAPETPAPSAPATSPQPVVTALPTAAPPTAAPPTAAPGGASFLDH
BO31171.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7443-PA | 139 | CG7443-PA | 1..139 | 1..139 | 727 | 100 | Plus |
CG7443-PB | 131 | CG7443-PB | 1..131 | 1..139 | 658 | 93.5 | Plus |