BO31172.complete Sequence
580 bp assembled on 2012-03-19
GenBank Submission: KX799385
> BO31172.complete
GAAGTTATCAGTCGACATGCTTCGATTCAATTTAATCGTGGCAGTTTGCG
AGAATTTCGGAATCGGCATCAGAGGCGATCTACCATGGCGCATTAAATCT
GAGCTGAAGTACTTCAGCCGCACCACCAAGCGAACAAGTGATCCCACCAA
GCAAAATGCCGTGGTAATGGGCAGGAAAACCTACTTCGGAGTGCCGGAAA
GCAAGAGGCCTCTTCCCGATCGGCTGAACATAGTGCTGAGCACCACACTT
CAGGAAAGTGATCTGCCCAAGGGAGTACTATTGTGCCCCAATCTCGAGAC
GGCCATGAAGATCCTTGAGGAGCAGAACGAAGTGGAGAACATTTGGATTG
TGGGCGGTAGTGGAGTCTACGAGGAGGCCATGGCCTCGCCAAGGTGTCAC
CGGCTGTACATTACCAAAATAATGCAGAAGTTCGATTGCGACACCTTTTT
CCCCGCGATCCCTGACAGCTTTCGAGAGGTCGCGCCCGATTCCGACATGC
CACTGGGTGTGCAGGAGGAGAATGGCATTAAATTCGAGTACAAGATTTTG
GAGAAACACTCAGCAAGCTTTCTAGACCAT
BO31172.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:38:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dhfr-RB | 549 | CG14887-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
| Dhfr-RA | 549 | CG14887-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:38:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dhfr-RB | 662 | CG14887-RB | 95..640 | 17..562 | 2730 | 100 | Plus |
| Dhfr-RA | 595 | CG14887-RA | 28..573 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:38:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16481391..16481856 | 97..562 | 2330 | 100 | Plus |
| 3R | 32079331 | 3R | 16481261..16481340 | 17..96 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:38:30 has no hits.
BO31172.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:15 Download gff for
BO31172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dhfr-RB | 63..608 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:16 Download gff for
BO31172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dhfr-RA | 28..573 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:15:24 Download gff for
BO31172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dhfr-RA | 28..573 | 17..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:15:24 Download gff for
BO31172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16481261..16481340 | 17..96 | 100 | -> | Plus |
| 3R | 16481391..16481856 | 97..564 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:16 Download gff for
BO31172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12306983..12307062 | 17..96 | 100 | -> | Plus |
| arm_3R | 12307113..12307578 | 97..564 | 99 | | Plus |
BO31172.pep Sequence
Translation from 16 to 580
> BO31172.pep
MLRFNLIVAVCENFGIGIRGDLPWRIKSELKYFSRTTKRTSDPTKQNAVV
MGRKTYFGVPESKRPLPDRLNIVLSTTLQESDLPKGVLLCPNLETAMKIL
EEQNEVENIWIVGGSGVYEEAMASPRCHRLYITKIMQKFDCDTFFPAIPD
SFREVAPDSDMPLGVQEENGIKFEYKILEKHSASFLDH
BO31172.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dhfr-PB | 182 | CG14887-PB | 1..182 | 1..182 | 956 | 100 | Plus |
| Dhfr-PA | 182 | CG14887-PA | 1..182 | 1..182 | 956 | 100 | Plus |
