BO31173.complete Sequence
622 bp assembled on 2012-03-19
GenBank Submission: KX795111
> BO31173.complete
GAAGTTATCAGTCGACATGGACGAAATCCTCTTTCCCACGCAGCAAAAAA
GCAACTCCCTAAGCGACGGCGACGATGTCGACCTGAAATTCTTCCAGTCG
GCCTCCGGCGAGCGGAAGGACAGCGACACCTCGGATCCGGGAAACGATGC
GGATCGTGATGGCAAGGATGCGGATGGGGACAACGACAACAAGAACACGG
ACGGAGATGGTGACTCTGGCGAGCCGGCGCACAAAAAGCTCAAGACGAAG
AAGGAACTGGAGGAGGAGGAGCGCGAACGAATGCAGGTTCTCGTTTCCAA
CTTTACGGAAGAACAGCTGGATCGCTACGAAATGTATCGTCGCTCTGCCT
TTCCCAAGGCCGCCGTCAAGCGTCTAATGCAAACTATCACCGGCTGTTCC
GTGTCCCAGAATGTTGTGATAGCCATGTCCGGCATTGCGAAGGTCTTCGT
CGGCGAGGTTGTGGAGGAAGCCCTCGACGTGATGGAGGCCCAAGGTGAAT
CCGGTGCCCTGCAGCCCAAATTCATACGAGAGGCAGTGCGACGACTGAGG
ACCAAGGATCGGATGCCCATAGGCAGATACCAGCAGCCCTATTTCAGACT
GAACGCAAGCTTTCTAGACCAT
BO31173.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:02:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf11-RA | 591 | CG4079-PA | 1..588 | 17..604 | 2940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:02:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf11-RA | 777 | CG4079-RA | 89..676 | 17..604 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:02:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9762525..9762843 | 604..286 | 1595 | 100 | Minus |
2L | 23513712 | 2L | 9762905..9763174 | 286..17 | 1350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:02:41 has no hits.
BO31173.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:19 Download gff for
BO31173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf11-RA | 71..658 | 17..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:56 Download gff for
BO31173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf11-RA | 89..676 | 17..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:00 Download gff for
BO31173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf11-RA | 89..676 | 17..606 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:00 Download gff for
BO31173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9762521..9762843 | 286..606 | 99 | <- | Minus |
2L | 9762906..9763174 | 17..285 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:56 Download gff for
BO31173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9762521..9762843 | 286..606 | 99 | <- | Minus |
arm_2L | 9762906..9763174 | 17..285 | 100 | | Minus |
BO31173.pep Sequence
Translation from 16 to 622
> BO31173.pep
MDEILFPTQQKSNSLSDGDDVDLKFFQSASGERKDSDTSDPGNDADRDGK
DADGDNDNKNTDGDGDSGEPAHKKLKTKKELEEEERERMQVLVSNFTEEQ
LDRYEMYRRSAFPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVGEVVE
EALDVMEAQGESGALQPKFIREAVRRLRTKDRMPIGRYQQPYFRLNASFL
DH
BO31173.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf11-PA | 196 | CG4079-PA | 1..196 | 1..196 | 1002 | 100 | Plus |