Clone BO31173 Report

Search the DGRC for BO31173

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:311
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptTaf11-RA
Protein status:BO31173.pep: Imported from assembly
Sequenced Size:622

Clone Sequence Records

BO31173.complete Sequence

622 bp assembled on 2012-03-19

GenBank Submission: KX795111

> BO31173.complete
GAAGTTATCAGTCGACATGGACGAAATCCTCTTTCCCACGCAGCAAAAAA
GCAACTCCCTAAGCGACGGCGACGATGTCGACCTGAAATTCTTCCAGTCG
GCCTCCGGCGAGCGGAAGGACAGCGACACCTCGGATCCGGGAAACGATGC
GGATCGTGATGGCAAGGATGCGGATGGGGACAACGACAACAAGAACACGG
ACGGAGATGGTGACTCTGGCGAGCCGGCGCACAAAAAGCTCAAGACGAAG
AAGGAACTGGAGGAGGAGGAGCGCGAACGAATGCAGGTTCTCGTTTCCAA
CTTTACGGAAGAACAGCTGGATCGCTACGAAATGTATCGTCGCTCTGCCT
TTCCCAAGGCCGCCGTCAAGCGTCTAATGCAAACTATCACCGGCTGTTCC
GTGTCCCAGAATGTTGTGATAGCCATGTCCGGCATTGCGAAGGTCTTCGT
CGGCGAGGTTGTGGAGGAAGCCCTCGACGTGATGGAGGCCCAAGGTGAAT
CCGGTGCCCTGCAGCCCAAATTCATACGAGAGGCAGTGCGACGACTGAGG
ACCAAGGATCGGATGCCCATAGGCAGATACCAGCAGCCCTATTTCAGACT
GAACGCAAGCTTTCTAGACCAT

BO31173.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:02:42
Subject Length Description Subject Range Query Range Score Percent Strand
Taf11-RA 591 CG4079-PA 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:02:42
Subject Length Description Subject Range Query Range Score Percent Strand
Taf11-RA 777 CG4079-RA 89..676 17..604 2940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:02:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9762525..9762843 604..286 1595 100 Minus
2L 23513712 2L 9762905..9763174 286..17 1350 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:02:41 has no hits.

BO31173.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:19 Download gff for BO31173.complete
Subject Subject Range Query Range Percent Splice Strand
Taf11-RA 71..658 17..606 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:56 Download gff for BO31173.complete
Subject Subject Range Query Range Percent Splice Strand
Taf11-RA 89..676 17..606 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:00 Download gff for BO31173.complete
Subject Subject Range Query Range Percent Splice Strand
Taf11-RA 89..676 17..606 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:00 Download gff for BO31173.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9762521..9762843 286..606 99 <- Minus
2L 9762906..9763174 17..285 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:56 Download gff for BO31173.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9762521..9762843 286..606 99 <- Minus
arm_2L 9762906..9763174 17..285 100   Minus

BO31173.pep Sequence

Translation from 16 to 622

> BO31173.pep
MDEILFPTQQKSNSLSDGDDVDLKFFQSASGERKDSDTSDPGNDADRDGK
DADGDNDNKNTDGDGDSGEPAHKKLKTKKELEEEERERMQVLVSNFTEEQ
LDRYEMYRRSAFPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVGEVVE
EALDVMEAQGESGALQPKFIREAVRRLRTKDRMPIGRYQQPYFRLNASFL
DH

BO31173.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
Taf11-PA 196 CG4079-PA 1..196 1..196 1002 100 Plus