BO31174.complete Sequence
823 bp assembled on 2012-03-19
GenBank Submission: KX799947
> BO31174.complete
GAAGTTATCAGTCGACATGTGCGAAAAGGTCACCGCGCGCTGCACTTGGC
CCCAGCTGTCGGGCAACGGGCTGGACCAACTGGTGGCCACCCGCTTGTCC
GACGAAGACGTCTTTGTGAAGCCCGACTTGGACGACGTGATCGACGAGAA
TCGCGCCGTGCTGTTTTCCATGCAGTCGGCGGATCCGCCGCCGCCTTGTG
AGCTGCGCTTCCAGATCCCGAACCGCTTCAAAATCGCCGCGCTCACCCTG
ATTTGCAGCGCTCCCAAGGTGGAGCTGTTCATTGGACCCTTGCAGGAGTA
CTGCGAGACCATCTACGGCACTTGCGTCGACGATGAGGACCCAGAGGTTG
CGGTGCGACCCTATCGCTATGACATGGAAATCGACCGATCCGGGATAAAT
GACATAAACCTGAAGATGCTCACCTCGGCCAGCGAGATCTGCGTTTACGG
AGCCCTGCTCCAGGTGGCGCCGAATCCCAACGGCATAACCACCCAGTTGC
CCAGGCCAATGGATGCGCAGCGAATCCAAGAGCTGCTGCAAAGGGGTGGC
ACGAGTCCCTTGAAGAAGGAGGAGCAGGCCGAAAAGTTCGAGCAGTTCAT
GAGCCTGATGAAGGGCTATTCCCCGCAGGCGAAGGACCAAACCCAAGAGA
CTGCACCGCCTTCCACCGATGTTGCAATCCTCAAGGAGCACATCGACATG
AGATTTGAGAAGCTGACGCTGTTAGTGTCTAAGAGACTGGACAACTTCGA
GGCCCAGCAGACGGAAAAGTTAAACAAAATTATTGCCTTGCTGGAAAAGG
AAAAAGCAAGCTTTCTAGACCAT
BO31174.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:02:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11882-RB | 792 | CG11882-PB | 1..789 | 17..805 | 3945 | 100 | Plus |
| CG11882-RA | 792 | CG11882-PA | 1..789 | 17..805 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:02:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11882-RB | 1018 | CG11882-RB | 49..838 | 16..805 | 3950 | 100 | Plus |
| CG11882-RA | 1087 | CG11882-RA | 118..907 | 16..805 | 3950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29147196..29147880 | 805..121 | 3425 | 100 | Minus |
| 3R | 32079331 | 3R | 29147950..29148055 | 121..16 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:02:44 has no hits.
BO31174.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:20 Download gff for
BO31174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11882-RA | 119..896 | 17..794 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:58 Download gff for
BO31174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11882-RA | 119..896 | 17..794 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:02 Download gff for
BO31174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11882-RA | 119..896 | 17..794 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:02 Download gff for
BO31174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29147207..29147880 | 121..794 | 100 | <- | Minus |
| 3R | 29147951..29148054 | 17..120 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:58 Download gff for
BO31174.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24972929..24973602 | 121..794 | 100 | <- | Minus |
| arm_3R | 24973673..24973776 | 17..120 | 100 | | Minus |
BO31174.pep Sequence
Translation from 16 to 823
> BO31174.pep
MCEKVTARCTWPQLSGNGLDQLVATRLSDEDVFVKPDLDDVIDENRAVLF
SMQSADPPPPCELRFQIPNRFKIAALTLICSAPKVELFIGPLQEYCETIY
GTCVDDEDPEVAVRPYRYDMEIDRSGINDINLKMLTSASEICVYGALLQV
APNPNGITTQLPRPMDAQRIQELLQRGGTSPLKKEEQAEKFEQFMSLMKG
YSPQAKDQTQETAPPSTDVAILKEHIDMRFEKLTLLVSKRLDNFEAQQTE
KLNKIIALLEKEKASFLDH
BO31174.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11882-PB | 263 | CG11882-PB | 1..263 | 1..263 | 1360 | 100 | Plus |
| CG11882-PA | 263 | CG11882-PA | 1..263 | 1..263 | 1360 | 100 | Plus |
