BO31176.complete Sequence
520 bp assembled on 2012-03-19
GenBank Submission: KX799891
> BO31176.complete
GAAGTTATCAGTCGACATGCCATTTTTAAGAAAGCTGGTCAGACAAGAAT
TTTGCTTTTGCATCTCGCTGACTTCTGGATGCATCATAGTTTCATTCTAC
ACACTGTTTTTCGGATTCCTTAACGCAGGCACTACTGTGGATGAGGTTAT
ATACAAGAACACACTCAAGACTGATGTTTATGCGAAATGGTTCAATGTAT
TTCATATAGCTCTGATGATCGCAGCTGCAGTTATCCTGCTGATATCTGTT
ATGACGAAGTACTTAAGGATCGTTTTCGTGTGGATGGCCATGTTCATCAT
TCATATGATATCGTACTACATCATCTTCAATGCTTTGATAAATGTTCGCA
ATCCGTTCTTTAAAAGTGCTGTCTCTGCGATTATTTATGTTTTCGTGAAT
TTAGTGACGTTGGGAATCGATTTATTTTGTTTGCTCAAAGTCTACACGTA
TTATTATGTAAAAGCGCATCCAGATGAATTCAGACCAGTTTGTGTGGATA
AAGCAAGCTTTCTAGACCAT
BO31176.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:02:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42263-RB | 489 | CG42263-PB | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:02:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42263-RB | 1089 | CG42263-RB | 48..533 | 17..502 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:02:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19955246..19955404 | 414..256 | 795 | 100 | Minus |
| 3L | 28110227 | 3L | 19955608..19955752 | 161..17 | 725 | 100 | Minus |
| 3L | 28110227 | 3L | 19955453..19955547 | 256..162 | 475 | 100 | Minus |
| 3L | 28110227 | 3L | 19955103..19955192 | 502..413 | 450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:02:52 has no hits.
BO31176.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:22 Download gff for
BO31176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..533 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:03 Download gff for
BO31176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..533 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:07 Download gff for
BO31176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42263-RB | 48..533 | 17..504 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:07 Download gff for
BO31176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19955100..19955191 | 414..504 | 97 | <- | Minus |
| 3L | 19955247..19955403 | 257..413 | 100 | <- | Minus |
| 3L | 19955453..19955547 | 162..256 | 100 | <- | Minus |
| 3L | 19955608..19955752 | 17..161 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:03 Download gff for
BO31176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19948200..19948291 | 414..504 | 97 | <- | Minus |
| arm_3L | 19948347..19948503 | 257..413 | 100 | <- | Minus |
| arm_3L | 19948553..19948647 | 162..256 | 100 | <- | Minus |
| arm_3L | 19948708..19948852 | 17..161 | 100 | | Minus |
BO31176.pep Sequence
Translation from 16 to 520
> BO31176.pep
MPFLRKLVRQEFCFCISLTSGCIIVSFYTLFFGFLNAGTTVDEVIYKNTL
KTDVYAKWFNVFHIALMIAAAVILLISVMTKYLRIVFVWMAMFIIHMISY
YIIFNALINVRNPFFKSAVSAIIYVFVNLVTLGIDLFCLLKVYTYYYVKA
HPDEFRPVCVDKASFLDH
BO31176.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42263-PB | 162 | CG42263-PB | 1..162 | 1..162 | 843 | 100 | Plus |
