BO31186.complete Sequence
589 bp assembled on 2012-03-19
GenBank Submission: KX795313
> BO31186.complete
GAAGTTATCAGTCGACATGAAAACAGCTATCATTCTGCTTATAGCCCTTG
GGGCATGTGCTGCTGAGCCTTCTCCCCGAACTCTAAACTCATTTTGCTCT
TACTTAGACGATGGAAAGGAAACTGTTTCGAGTCTGGGCAACACCAAGAA
GTGTTTTGCTCGTTACCTACCGGAACTGGAAAGTGAAGGGGCTACCTGGT
CGCAAGGATATAATGCCTGTCAGAAGATTACCATTAACGAGCGGCTGTCC
TTGCTAACGGATGCCACTGAGGCTCAGGAGGAGATTCGAGAGGCTGCCCT
GGGCATATCATCATTTATTGATCAGTGTTTGGTCCTGACGGAGGCCGTGG
ACTTTTTCAACTGCTTTGCCAAAATGGCTAAGTTACAGTTGGCGAATGTC
TACAGTATATCATTTAATGCCACCGAGCAGGCTTTAATCCTAAATAAGAA
ATTAAGTAGAATCGAATTGGAGCACTATCGCTGCACAAATCAAACCGAAC
AAAATTATGTCAAAGGAACCAATACAATCTTTCGATCTTTGGATCAGTGT
CTGCAGCAAAATGATACACACGCAAGCTTTCTAGACCAT
BO31186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:03:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34005-RC | 558 | CG34005-PC | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG34005-RB | 558 | CG34005-PB | 1..555 | 17..571 | 2775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:03:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34005-RC | 633 | CG34005-RC | 27..582 | 16..571 | 2780 | 100 | Plus |
| CG34005-RB | 694 | CG34005-RB | 27..582 | 16..571 | 2780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18048222..18048547 | 52..377 | 1630 | 100 | Plus |
| 2R | 25286936 | 2R | 18048602..18048797 | 376..571 | 980 | 100 | Plus |
| 2R | 25286936 | 2R | 18048134..18048171 | 16..53 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:03:09 has no hits.
BO31186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:25 Download gff for
BO31186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34005-RB | 24..578 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:12 Download gff for
BO31186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34005-RB | 28..582 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:15 Download gff for
BO31186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34005-RB | 28..582 | 17..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:15 Download gff for
BO31186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18048603..18048797 | 377..573 | 98 | | Plus |
| 2R | 18048223..18048546 | 53..376 | 100 | -> | Plus |
| 2R | 18048135..18048170 | 17..52 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:12 Download gff for
BO31186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13935640..13935675 | 17..52 | 100 | -> | Plus |
| arm_2R | 13935728..13936051 | 53..376 | 100 | -> | Plus |
| arm_2R | 13936108..13936302 | 377..573 | 98 | | Plus |
BO31186.pep Sequence
Translation from 16 to 589
> BO31186.pep
MKTAIILLIALGACAAEPSPRTLNSFCSYLDDGKETVSSLGNTKKCFARY
LPELESEGATWSQGYNACQKITINERLSLLTDATEAQEEIREAALGISSF
IDQCLVLTEAVDFFNCFAKMAKLQLANVYSISFNATEQALILNKKLSRIE
LEHYRCTNQTEQNYVKGTNTIFRSLDQCLQQNDTHASFLDH
BO31186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34005-PC | 185 | CG34005-PC | 1..185 | 1..185 | 950 | 100 | Plus |
| CG34005-PB | 185 | CG34005-PB | 1..185 | 1..185 | 950 | 100 | Plus |
| CG5767-PA | 253 | CG5767-PA | 1..186 | 1..180 | 223 | 30.6 | Plus |
| CG5770-PA | 213 | CG5770-PA | 7..184 | 5..180 | 208 | 27.9 | Plus |
| CG10911-PA | 359 | CG10911-PA | 7..185 | 4..179 | 171 | 24.4 | Plus |
