Clone BO31211 Report

Search the DGRC for BO31211

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:312
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG42830-RA
Protein status:BO31211.pep: Imported from assembly
Sequenced Size:595

Clone Sequence Records

BO31211.complete Sequence

595 bp assembled on 2012-03-19

GenBank Submission: KX795474

> BO31211.complete
GAAGTTATCAGTCGACATGAGTCACATAACTCGAAAGCGTTTACTAACTT
TGGATGAGGAATCTCAGCATATCAATTCGACAAAACGATGTGGGAGCAAC
TGCATCGAGAAGATGTTAACAAAATGGTCCCGCCAAAGTATTCCAGGCGT
CAATAGCATTTCGCGGAAGCGATCGTTTCCTTGGGAGGATAACTCGCCTG
ATATATTTCCCGCAAAACATTCACGAAAGCATATCATAAAAAAGAAGTCG
AAAACAATTCACGAGCCAGAGGTCCCGATAGATTTTTTGATGGGACTGCC
AGTATTGCTTGATAGTGACTTTAGTGATTCGGAGGAATGTCGCCCAAAAT
CAGAGATTCATGTGGCCAAACCAGAAACTGAAGATAACCGAGATTTGTTT
ACCTATCAGCAATTGAAATTAATGTGCTGCGAAATGATGAAACAATGCGA
AGATCGGGTAGTACTGGAATATGAAATAGCATTGACTCAAAAAATGGCAG
AGCAGTATGATACATTCATCAAGTTCAACCACGACCAATTGCAGCGAGAA
TGTGAACATAGGGCTAGTTATTTGTCTGCAAGCTTTCTAGACCAT

BO31211.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:04:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG42830-RA 564 CG42830-PA 1..561 17..577 2805 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:04:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG42830-RA 720 CG42830-RA 67..629 15..577 2815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17812044..17812606 577..15 2815 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:04:17 has no hits.

BO31211.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:35:18 Download gff for BO31211.complete
Subject Subject Range Query Range Percent Splice Strand
CG42830-RA 1..561 17..579 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:48 Download gff for BO31211.complete
Subject Subject Range Query Range Percent Splice Strand
CG42830-RA 69..629 17..579 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:47 Download gff for BO31211.complete
Subject Subject Range Query Range Percent Splice Strand
CG42830-RA 69..629 17..579 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:47 Download gff for BO31211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17812042..17812604 17..579 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:48 Download gff for BO31211.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17812042..17812604 17..579 99   Minus

BO31211.pep Sequence

Translation from 16 to 595

> BO31211.pep
MSHITRKRLLTLDEESQHINSTKRCGSNCIEKMLTKWSRQSIPGVNSISR
KRSFPWEDNSPDIFPAKHSRKHIIKKKSKTIHEPEVPIDFLMGLPVLLDS
DFSDSEECRPKSEIHVAKPETEDNRDLFTYQQLKLMCCEMMKQCEDRVVL
EYEIALTQKMAEQYDTFIKFNHDQLQRECEHRASYLSASFLDH

BO31211.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG42830-PA 187 CG42830-PA 1..187 1..187 996 100 Plus
akirin-PF 201 CG8580-PF 1..201 1..187 169 29.1 Plus
akirin-PE 201 CG8580-PE 1..201 1..187 169 29.1 Plus
akirin-PD 201 CG8580-PD 1..201 1..187 169 29.1 Plus
akirin-PC 201 CG8580-PC 1..201 1..187 169 29.1 Plus