BO31235.complete Sequence
310 bp assembled on 2012-03-19
GenBank Submission: KX794624
> BO31235.complete
GAAGTTATCAGTCGACATGACTTTTGCAAGGTGGAACTGGACTATTTTCC
CGTGTATGATCCCGACGAGCTTTCCAATCTGGATGCGAATCTTTCAAAGC
CGGGCAATAGCACAAAACGCTCATATTATTCACCGCATCCTGAGGCCAGA
AGGTCGAATAGAACCGCTGAAAAACAATTTGTCAAAGATGTTCAACTACG
ATATTCTCATGGCTTACAACTGCGACGGTGAGCTCTCAGTCAGCAGTCAG
TCATCTCATACAAATATATTAACGAAACTATTTTTGGGGTCCGCAAGCTT
TCTAGACCAT
BO31235.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:03:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17977-RA | 279 | CG17977-PA | 1..276 | 17..292 | 1380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:03:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17977-RA | 966 | CG17977-RA | 212..487 | 17..292 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:03:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8067125..8067293 | 287..119 | 845 | 100 | Minus |
2R | 25286936 | 2R | 8067342..8067444 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:03:38 has no hits.
BO31235.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:31 Download gff for
BO31235.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 209..484 | 17..294 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:27 Download gff for
BO31235.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 212..487 | 17..294 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:27 Download gff for
BO31235.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 212..487 | 17..294 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:27 Download gff for
BO31235.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8067125..8067293 | 119..287 | 100 | <- | Minus |
2R | 8067343..8067444 | 17..118 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:27 Download gff for
BO31235.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3954630..3954798 | 119..287 | 100 | <- | Minus |
arm_2R | 3954848..3954949 | 17..118 | 100 | | Minus |
BO31235.pep Sequence
Translation from 16 to 310
> BO31235.pep
MTFARWNWTIFPCMIPTSFPIWMRIFQSRAIAQNAHIIHRILRPEGRIEP
LKNNLSKMFNYDILMAYNCDGELSVSSQSSHTNILTKLFLGSASFLDH
BO31235.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17977-PA | 92 | CG17977-PA | 1..92 | 1..92 | 493 | 100 | Plus |