BO31249.complete Sequence
385 bp assembled on 2012-03-19
GenBank Submission: KX794360
> BO31249.complete
GAAGTTATCAGTCGACATGGCCGATGATGAAGATAAACCAAAGAAGCACA
CGCTGGACAGCCTGTTCTTGGTGTATTCCAACTTCCAGGTCATACCCACC
GACATCGAGAACGAGTACTTTGACAGCATACTCCTCTCGCAGTTGGACGC
CTGGCTAGAGCAGGCCAAGCTCATGCCCAATCCCATAACTCGAACTCAGA
CCGGTTTAATATACATGCGATACAAGAAATGGCGTTTGGAGTACGAAGAC
TTTCTCGAGGTCCTAAATAACTTGGCATCCGATAACAATCTGGCTATAGA
TGAAATGAAGCAAATAATGATCGATGCTGGCGTCCCGAATGGTGCTGATG
TAGTTATAGTCGTCAAGGCAAGCTTTCTAGACCAT
BO31249.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:03:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6709-RB | 354 | CG6709-PB | 1..351 | 17..367 | 1755 | 100 | Plus |
| CG6709-RA | 354 | CG6709-PA | 1..351 | 17..367 | 1755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:03:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14164-RB | 1331 | CG14164-RB | 846..1196 | 17..367 | 1755 | 100 | Plus |
| CG6709-RB | 1331 | CG6709-RB | 846..1196 | 17..367 | 1755 | 100 | Plus |
| CG6709-RA | 596 | CG6709-RA | 111..461 | 17..367 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9893323..9893464 | 367..226 | 710 | 100 | Minus |
| 3L | 28110227 | 3L | 9893517..9893658 | 226..85 | 710 | 100 | Minus |
| 3L | 28110227 | 3L | 9893707..9893780 | 90..17 | 370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:03:42 has no hits.
BO31249.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:32 Download gff for
BO31249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6709-RB | 846..1196 | 17..369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:29 Download gff for
BO31249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14164-RB | 846..1196 | 17..369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:29 Download gff for
BO31249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6709-RA | 111..461 | 17..369 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:29 Download gff for
BO31249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9893321..9893464 | 226..369 | 98 | <- | Minus |
| 3L | 9893518..9893654 | 89..225 | 100 | <- | Minus |
| 3L | 9893709..9893780 | 17..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:29 Download gff for
BO31249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9886421..9886564 | 226..369 | 98 | <- | Minus |
| arm_3L | 9886618..9886754 | 89..225 | 100 | <- | Minus |
| arm_3L | 9886809..9886880 | 17..88 | 100 | | Minus |
BO31249.pep Sequence
Translation from 16 to 385
> BO31249.pep
MADDEDKPKKHTLDSLFLVYSNFQVIPTDIENEYFDSILLSQLDAWLEQA
KLMPNPITRTQTGLIYMRYKKWRLEYEDFLEVLNNLASDNNLAIDEMKQI
MIDAGVPNGADVVIVVKASFLDH
BO31249.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6709-PB | 117 | CG6709-PB | 1..117 | 1..117 | 604 | 100 | Plus |
| CG6709-PA | 117 | CG6709-PA | 1..117 | 1..117 | 604 | 100 | Plus |
| CG45057-PB | 192 | CG45057-PB | 30..141 | 5..122 | 139 | 30.5 | Plus |
| CG45057-PD | 192 | CG45057-PD | 30..141 | 5..122 | 139 | 30.5 | Plus |
| CG45057-PC | 192 | CG45057-PC | 30..141 | 5..122 | 139 | 30.5 | Plus |
