BO31252.complete Sequence
1300 bp assembled on 2012-03-19
GenBank Submission: KX795374
> BO31252.complete
GAAGTTATCAGTCGACATGGCGACTGCTTTGGAACTGAGTCCAACCGAGA
TTCGCGGCCTGTGCCAGCGGTACTTTCATCAAGATGTTTCCAATTCGGAT
ACGGGGTTCGATATAGTCAACTATACTCTTAAGCCCACCTCGGATGCTCC
AGCCGGATACTTGGGCAGCCACCTCTACCTGCACGTCACTCTGAAGCTTC
ACAATTCCGAGGAGGTCCGGCAGCTCACATTCTTCTCGAAGTCGGCGCCC
GTGGGTAATGAGTCGCGAATGGAATACCTAGAGGATTTTGGAGTGTTCGA
AAAGGAAATCGCTGTCTACCAGAACGTTCTACCCGATCTTCACAAGGCCT
GTGCAGAAGTGGCGCCCAAGTGCTATTACGCGGACAAGAATCTACTGATC
TTTGAGAACCTCGCAGATCAGGGCTATCGAATGGGTGCTGGACGGGATGG
TCTGCTGACCTATGAGCAGCTCCATTGCTGTCTAAAAACCTTGGCCGCCA
TGCATGCTGGTTCCATAATCCAGGAACAGAGAACGGGACAAAAAATAGCA
CAGTCTCAGCCTAAATCAGTGGTGGAGAATGCCTATCCCAGTGATGTGTC
GCCGGAACATATGAGGATGGTGAATTTTCAAAATGCCTGTCTGGTGCTCA
AGGAGTTCATCAAACTAATACCCAAATATCAGTCCAAGTTGGATTACGTA
TTGGAAAACTTTACAGAAAAGATGTCCTTTATTTTTGAGGCCGTCAAGAC
CTCGGATGTGTACCAGAATACCATACTCCATGGCGATTTGTGGGCCAATA
ATATCATGTTCCAGTATGGCAGATATGGCGAGGTTCCACTGCAGTGCCGC
CTTGTGGACTTCCAGTTGGCCAGATATGCCCCACCTGTCCTCGATGTCCT
GACCGTTCTCACCATTCCCACTTCAAAAGAGTTCAGGGACGCCCATCTCA
GTGAACTTCTGGCGGAATACTACCGGTTCATGACCGAGTTCCTGAAGCGT
GCTGACTTGGATATAGCGCGTTTTATTCCAGAACAGACTTTCTATGAATC
CGTGCAAAAGTTTCGAAGTGTTGGCCTGATCGAAAGCTGTTTGTTCTGTC
ACCTGGTTATTCTACCACCTCACTGCACTCAGAAACTGACCAGTTCTGTG
GATGGCTTTAACGACTTTTTCACTAATAAACGCATAGAGATTTGCCTGGA
GGCCTTCAACACGGATGAGTTGTACAGAAGTCGGCTGGTCGACATGATTG
AAGACTTTGTAGATCAATTTGTTATAAATGTTGCAAGCTTTCTAGACCAT
BO31252.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:03:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9259-RC | 1269 | CG9259-PC | 1..1266 | 17..1282 | 6330 | 100 | Plus |
| CG9259-RB | 1269 | CG9259-PB | 1..1266 | 17..1282 | 6330 | 100 | Plus |
| CG9259-RA | 1269 | CG9259-PA | 1..1266 | 17..1282 | 6330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:03:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9259-RC | 1466 | CG9259-RC | 129..1399 | 12..1282 | 6340 | 99.9 | Plus |
| CG9259-RB | 1353 | CG9259-RB | 16..1286 | 12..1282 | 6340 | 99.9 | Plus |
| CG9259-RA | 1453 | CG9259-RA | 16..1286 | 12..1282 | 6340 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:03:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21089562..21090832 | 12..1282 | 6340 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:03:45 has no hits.
BO31252.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:32 Download gff for
BO31252.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9259-RA | 3..1268 | 17..1284 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:30 Download gff for
BO31252.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9259-RA | 21..1286 | 17..1284 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:30 Download gff for
BO31252.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9259-RA | 21..1286 | 17..1284 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:30 Download gff for
BO31252.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21089567..21090832 | 17..1284 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:30 Download gff for
BO31252.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21089567..21090832 | 17..1284 | 99 | | Plus |
BO31252.pep Sequence
Translation from 16 to 1300
> BO31252.pep
MATALELSPTEIRGLCQRYFHQDVSNSDTGFDIVNYTLKPTSDAPAGYLG
SHLYLHVTLKLHNSEEVRQLTFFSKSAPVGNESRMEYLEDFGVFEKEIAV
YQNVLPDLHKACAEVAPKCYYADKNLLIFENLADQGYRMGAGRDGLLTYE
QLHCCLKTLAAMHAGSIIQEQRTGQKIAQSQPKSVVENAYPSDVSPEHMR
MVNFQNACLVLKEFIKLIPKYQSKLDYVLENFTEKMSFIFEAVKTSDVYQ
NTILHGDLWANNIMFQYGRYGEVPLQCRLVDFQLARYAPPVLDVLTVLTI
PTSKEFRDAHLSELLAEYYRFMTEFLKRADLDIARFIPEQTFYESVQKFR
SVGLIESCLFCHLVILPPHCTQKLTSSVDGFNDFFTNKRIEICLEAFNTD
ELYRSRLVDMIEDFVDQFVINVASFLDH
BO31252.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9259-PC | 422 | CG9259-PC | 1..422 | 1..422 | 2208 | 100 | Plus |
| CG9259-PB | 422 | CG9259-PB | 1..422 | 1..422 | 2208 | 100 | Plus |
| CG9259-PA | 422 | CG9259-PA | 1..422 | 1..422 | 2208 | 100 | Plus |
| CG33511-PB | 415 | CG33511-PB | 27..410 | 33..421 | 367 | 28.6 | Plus |
| CG13813-PA | 430 | CG13813-PA | 24..346 | 40..355 | 308 | 28.4 | Plus |
