Clone BO31253 Report

Search the DGRC for BO31253

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:312
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptCG11629-RA
Protein status:BO31253.pep: Imported from assembly
Sequenced Size:1423

Clone Sequence Records

BO31253.complete Sequence

1423 bp assembled on 2012-03-19

GenBank Submission: KX797705

> BO31253.complete
GAAGTTATCAGTCGACATGCTCAGCCTGAGGAATGGAATCTTCGCGGGCA
ATCTTCTCGGCAGCGGCTTTTGCCTTCAGCGATTTGCGCCCTGTGCCTGT
CGCTCTTCGCGAAAGCCTCCGGCGGGAAACTCCCCGAAGAACCCATACAA
GCAGCTGAACAATGACTCGGTGGAGGAGAAACGCCTGTCGGTCCTGATGG
AGCTGGGGTGTCGATGTCCGCAGAAGTCGCACAAGGAGCGTTGGTTCCTC
ACCAACCAGCGCATTATTTTGGCCCTGGCCACGACCCTGAATCGTCCGCC
GGATTTGGTGTCAGACTTTTTGCACACACTGACCCTCCAGAACTTTTCAG
AGATCCTTCATCCCGCCGAGACGGAGACCTTAAGCCCCTCTTGTAGAGTT
CCCTTTGTGAACTGCGGTGCCTGTGAGAACTTTATGAGAATTTTCGATAC
TCATGGGAATGTAAGGAGCCGCCTTAGCCAGGACTCACTGCAGCTACTAA
TGAGCGCCGTGCAAACTGTTTTGAAGCAATCTCCACCCACTGAGCTCCGT
GCATTTGATGCAGGCGTTAGCGGCCTACGAGGGACACTTAAAAGGGATTC
CATAGCGCGTAGAGCTGGTATCGATCACGACTCAATCGCTCGTCAAAACG
GCAGGAGGCGATTAAGAAACTCGGAAGCCAGGGCCTCAGAAAACAGAAGT
CATCTCAACACCGGCCTGGAGCAACGCACAGCAGGAGATCCTGGATATGT
TTTTGGATCCAGCCTTGAGTCCGCGGGCTTAGATGTCATGCACACGCCCG
AAAAATGGGTTTTCACGGATTCTTTAGCTTTAGAGCGGACCAGGCGGCTC
GCCAAATTGCTCATTCGCGTTAATGATAAGACTTATCTGACGCGCGATAC
TGAGAAACTAATAACTGCCATCAAAGACCTCAAATTGGACAGCAATGTCA
CAAATCCAAAAAAACAGCCGCCACGGCATAGCATCAAGGCCAATGTAAAT
TCCGATTCGTACTATGAAAGAGTCAAGGCTTCTGCTTCGAAAGCCGTGCT
CAAGAGCCACTCGGCACGCGGCTCGAAGAAAAGGAAGAAGGCCAGCGATG
TTGAGCCTGTTCCTAAGCGGACCACGAACCGAGTGTATTATGGCGATCCG
CTCCCGGTGCTCCTGCACGAACCATTTAATCGTGAAAAGCCGTGGACGTG
GTTGCGCCGACATCCCCAGCAGATGCGCATGGATGAAAAGGGTCAGGTGA
CACAGGGAAATATCCGTCGCTACCGGCGCCAAACCGTAGAGCAGATGATG
CAGAAAGCTAAGGAGCGATCATCGGTGATCACTGTGATCTCAACAGGTGA
CGAAAACGATTCCGTGAATGCGCAGCCCATGTTTGGTCAGGAAACTTCCG
GGAACGCAAGCTTTCTAGACCAT

BO31253.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:03:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11629-RA 1392 CG11629-PA 1..1389 17..1405 6945 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG11629-RA 1624 CG11629-RA 29..1417 17..1405 6945 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:03:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21896873..21898261 1405..17 6945 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:03:49 has no hits.

BO31253.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:33 Download gff for BO31253.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 29..1417 17..1407 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:32 Download gff for BO31253.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 29..1417 17..1407 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:31 Download gff for BO31253.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 29..1417 17..1407 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:31 Download gff for BO31253.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21896871..21898261 17..1407 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:32 Download gff for BO31253.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21896871..21898261 17..1407 99   Minus

BO31253.pep Sequence

Translation from 16 to 1423

> BO31253.pep
MLSLRNGIFAGNLLGSGFCLQRFAPCACRSSRKPPAGNSPKNPYKQLNND
SVEEKRLSVLMELGCRCPQKSHKERWFLTNQRIILALATTLNRPPDLVSD
FLHTLTLQNFSEILHPAETETLSPSCRVPFVNCGACENFMRIFDTHGNVR
SRLSQDSLQLLMSAVQTVLKQSPPTELRAFDAGVSGLRGTLKRDSIARRA
GIDHDSIARQNGRRRLRNSEARASENRSHLNTGLEQRTAGDPGYVFGSSL
ESAGLDVMHTPEKWVFTDSLALERTRRLAKLLIRVNDKTYLTRDTEKLIT
AIKDLKLDSNVTNPKKQPPRHSIKANVNSDSYYERVKASASKAVLKSHSA
RGSKKRKKASDVEPVPKRTTNRVYYGDPLPVLLHEPFNREKPWTWLRRHP
QQMRMDEKGQVTQGNIRRYRRQTVEQMMQKAKERSSVITVISTGDENDSV
NAQPMFGQETSGNASFLDH

BO31253.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG11629-PA 463 CG11629-PA 1..463 1..463 2402 100 Plus